RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
COL4A3-201ENST00000304990 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
COL4A3-201ENST00000304990 POLRMTO00411 1230 aaKnown RBP13.91□□□□□ -0.18
COL4A3-201ENST00000304990 USPL1Q5W0Q7 1092 aa13.91□□□□□ -0.18
COL4A3-201ENST00000304990 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
COL4A3-201ENST00000304990 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
COL4A3-201ENST00000304990 TRIM26Q12899 539 aaPredicted RBP13.9□□□□□ -0.18
COL4A3-201ENST00000304990 AMOTQ4VCS5 1084 aa13.9□□□□□ -0.18
COL4A3-201ENST00000304990 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
COL4A3-201ENST00000304990 TM4SF1P30408 202 aa13.89□□□□□ -0.19
COL4A3-201ENST00000304990 POTEHQ6S545 545 aa13.89□□□□□ -0.19
COL4A3-201ENST00000304990 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
COL4A3-201ENST00000304990 AIDAQ96BJ3 306 aa13.89□□□□□ -0.19
COL4A3-201ENST00000304990 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-201ENST00000304990 H0YIN7 160 aa13.88□□□□□ -0.19
COL4A3-201ENST00000304990 C2CD5Q86YS7 1000 aa13.88□□□□□ -0.19
COL4A3-201ENST00000304990 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
COL4A3-201ENST00000304990 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
COL4A3-201ENST00000304990 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
COL4A3-201ENST00000304990 SERPINB2P05120 415 aa13.86□□□□□ -0.19
COL4A3-201ENST00000304990 NFIXQ14938 502 aa13.86□□□□□ -0.19
COL4A3-201ENST00000304990 ERFEQ4G0M1 354 aa13.86□□□□□ -0.19
COL4A3-201ENST00000304990 INTS5Q6P9B9 1019 aaKnown RBP13.86□□□□□ -0.19
COL4A3-201ENST00000304990 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
COL4A3-201ENST00000304990 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
COL4A3-201ENST00000304990 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
COL4A3-201ENST00000304990 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
COL4A3-201ENST00000304990 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
COL4A3-201ENST00000304990 ZNF622Q969S3 477 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL4A3-201ENST00000304990 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
COL4A3-201ENST00000304990 FOXN1O15353 648 aa13.84□□□□□ -0.19
COL4A3-201ENST00000304990 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
COL4A3-201ENST00000304990 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
COL4A3-201ENST00000304990 CACNA1SQ13698 1873 aa13.84□□□□□ -0.19
COL4A3-201ENST00000304990 SOS1Q07889 1333 aaPredicted RBP13.84□□□□□ -0.19
COL4A3-201ENST00000304990 COL15A1P39059 1388 aa13.83□□□□□ -0.19
COL4A3-201ENST00000304990 NFKBIEO00221 500 aa13.83□□□□□ -0.2
COL4A3-201ENST00000304990 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
COL4A3-201ENST00000304990 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
COL4A3-201ENST00000304990 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
COL4A3-201ENST00000304990 POTECB2RU33 542 aa13.82□□□□□ -0.2
COL4A3-201ENST00000304990 NPHP1O15259 732 aa13.82□□□□□ -0.2
COL4A3-201ENST00000304990 C21orf2O43822 256 aa13.82□□□□□ -0.2
COL4A3-201ENST00000304990 FER1L6Q2WGJ9 1857 aa13.81□□□□□ -0.2
COL4A3-201ENST00000304990 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-201ENST00000304990 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
COL4A3-201ENST00000304990 CNTNAP1P78357 1384 aa13.81□□□□□ -0.2
COL4A3-201ENST00000304990 DDNO94850 711 aaPredicted RBP13.8□□□□□ -0.2
COL4A3-201ENST00000304990 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
COL4A3-201ENST00000304990 PDE6BP35913 854 aa13.8□□□□□ -0.2
COL4A3-201ENST00000304990 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
COL4A3-201ENST00000304990 TAOK3Q9H2K8 898 aa13.8□□□□□ -0.2
COL4A3-201ENST00000304990 CARMIL3Q8ND23 1372 aa13.8□□□□□ -0.2
COL4A3-201ENST00000304990 ANKRD31Q8N7Z5 1873 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 IQCA1LA6NCM1 817 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 SLC34A2O95436 690 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 PCNTO95613 3336 aa13.79□□□□□ -0.2
COL4A3-201ENST00000304990 POTEIP0CG38 1075 aa13.78□□□□□ -0.2
COL4A3-201ENST00000304990 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
COL4A3-201ENST00000304990 LBX1P52954 281 aa13.78□□□□□ -0.2
COL4A3-201ENST00000304990 SLC39A6Q13433 755 aa13.78□□□□□ -0.2
COL4A3-201ENST00000304990 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
COL4A3-201ENST00000304990 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-201ENST00000304990 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-201ENST00000304990 A0A087WZG4 1122 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 TMEM88BA6NKF7 163 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 SCN4AP35499 1836 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 VEGFBP49765 207 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 EAPPQ56P03 285 aaPredicted RBP13.77□□□□□ -0.21
COL4A3-201ENST00000304990 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
COL4A3-201ENST00000304990 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
COL4A3-201ENST00000304990 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
COL4A3-201ENST00000304990 MORC1Q86VD1 984 aa13.76□□□□□ -0.21
COL4A3-201ENST00000304990 CCDC24Q8N4L8 307 aa13.76□□□□□ -0.21
COL4A3-201ENST00000304990 BRIP1Q9BX63 1249 aa13.76□□□□□ -0.21
COL4A3-201ENST00000304990 STARD3NLO95772 234 aa13.75□□□□□ -0.21
COL4A3-201ENST00000304990 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
COL4A3-201ENST00000304990 CNKSR1Q969H4 720 aa13.75□□□□□ -0.21
COL4A3-201ENST00000304990 LGR6Q9HBX8 967 aa13.75□□□□□ -0.21
COL4A3-201ENST00000304990 PASKQ96RG2 1323 aa13.74□□□□□ -0.21
COL4A3-201ENST00000304990 LTBP3Q9NS15 1303 aa13.74□□□□□ -0.21
COL4A3-201ENST00000304990 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
COL4A3-201ENST00000304990 ST5P78524 1137 aa13.74□□□□□ -0.21
COL4A3-201ENST00000304990 TBC1D9BQ66K14 1250 aa13.74□□□□□ -0.21
COL4A3-201ENST00000304990 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
COL4A3-201ENST00000304990 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
COL4A3-201ENST00000304990 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 CCDC85CA6NKD9 419 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 PRR5LQ6MZQ0 368 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 VSIG10Q8N0Z9 540 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
COL4A3-201ENST00000304990 TAF1DQ9H5J8 278 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms