RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 METP08581 1390 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 KIAA1524Q8TCG1 905 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 STX6O43752 255 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 F13A1P00488 732 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 TPM3P06753 285 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 SYT1P21579 422 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 JARID2Q92833 1246 aaPredicted RBP11.36□□□□□ -0.59
LDB2-201ENST00000304523 ATP6V1DQ9Y5K8 247 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 SOS1Q07889 1333 aaPredicted RBP11.36□□□□□ -0.59
LDB2-201ENST00000304523 PRR36Q9H6K5 1346 aa11.36□□□□□ -0.59
LDB2-201ENST00000304523 KDRP35968 1356 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 SGSM2O43147 1006 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 FLIIQ13045 1269 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 ARID3AQ99856 593 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.35□□□□□ -0.59
LDB2-201ENST00000304523 SNX14Q9Y5W7 946 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 HSP90AB2PQ58FF8 381 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
LDB2-201ENST00000304523 MPNDQ8N594 471 aa11.35□□□□□ -0.59
LDB2-201ENST00000304523 SSH3Q8TE77 659 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 TSC1Q92574 1164 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 LIMCH1Q9UPQ0 1083 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 CHD2O14647 1828 aaKnown RBP11.34□□□□□ -0.59
LDB2-201ENST00000304523 AK2P54819 239 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 MTHFSDQ2M296 383 aaKnown RBP11.34□□□□□ -0.59
LDB2-201ENST00000304523 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 LSG1Q9H089 658 aaKnown RBP11.34□□□□□ -0.59
LDB2-201ENST00000304523 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 PPP6R1Q9UPN7 881 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
LDB2-201ENST00000304523 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 AGLP35573 1532 aa11.34□□□□□ -0.59
LDB2-201ENST00000304523 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
LDB2-201ENST00000304523 PRDM10Q9NQV6 1147 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 AP5Z1O43299 807 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 FOXO3O43524 673 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 CCDC30Q5VVM6 783 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 TXNDC2Q86VQ3 553 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 DIAPH3Q9NSV4 1193 aa11.33□□□□□ -0.6
LDB2-201ENST00000304523 USP6P35125 1406 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 CTIFO43310 598 aaKnown RBP11.32□□□□□ -0.6
LDB2-201ENST00000304523 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 ANKRD7Q92527 254 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 GTPBP4Q9BZE4 634 aaKnown RBP11.32□□□□□ -0.6
LDB2-201ENST00000304523 FIBPO43427 364 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
LDB2-201ENST00000304523 POLA2Q14181 598 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 SMC3Q9UQE7 1217 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
LDB2-201ENST00000304523 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 PYCARDQ9ULZ3 195 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 ATP2B3Q16720 1220 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
LDB2-201ENST00000304523 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 UBTFL1P0CB47 393 aaPredicted RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 LARGE1O95461 756 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 CCDC192P0DO97 292 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 VPS53Q5VIR6 699 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 CNTROBQ8N137 903 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 PDCL2Q8N4E4 241 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 RHPN1Q8TCX5 695 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 KCNB2Q92953 911 aa11.3□□□□□ -0.6
LDB2-201ENST00000304523 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
LDB2-201ENST00000304523 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 FLT4P35916 1363 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 ACEP12821 1306 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
LDB2-201ENST00000304523 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
LDB2-201ENST00000304523 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 KIF20AO95235 890 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 PDIA4P13667 645 aaKnown RBP11.29□□□□□ -0.6
LDB2-201ENST00000304523 GJB2P29033 226 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 CBX1P83916 185 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 BABAM1Q9NWV8 329 aa11.29□□□□□ -0.6
LDB2-201ENST00000304523 ELP1O95163 1332 aa11.28□□□□□ -0.6
LDB2-201ENST00000304523 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
LDB2-201ENST00000304523 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
LDB2-201ENST00000304523 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms