RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 OSBPL3Q9H4L5 887 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 USP25Q9UHP3 1055 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 SALL3Q9BXA9 1300 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 FIBPO43427 364 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 PPP1R42Q7Z4L9 355 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 ZKSCAN5Q9Y2L8 839 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
CTTN-201ENST00000301843 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
CTTN-201ENST00000301843 TSPY26PQ9H489 355 aa16.4■□□□□ 0.22
CTTN-201ENST00000301843 AMOTL2Q9Y2J4 779 aa16.4■□□□□ 0.22
CTTN-201ENST00000301843 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
CTTN-201ENST00000301843 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
CTTN-201ENST00000301843 TTC21AQ8NDW8 1320 aa16.4■□□□□ 0.22
CTTN-201ENST00000301843 SRGAP3O43295 1099 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 SLIT1O75093 1534 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 LARGE1O95461 756 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 CCDC30Q5VVM6 783 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 ARHGEF10O15013 1369 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 KCNQ3O43525 872 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 GNAI3P08754 354 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
CTTN-201ENST00000301843 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
CTTN-201ENST00000301843 TTC12Q9H892 705 aaPredicted RBP16.39■□□□□ 0.21
CTTN-201ENST00000301843 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
CTTN-201ENST00000301843 CEP170BQ9Y4F5 1589 aaPredicted RBP16.39■□□□□ 0.21
CTTN-201ENST00000301843 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
CTTN-201ENST00000301843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTTN-201ENST00000301843 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
CTTN-201ENST00000301843 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
CTTN-201ENST00000301843 CUL4AQ13619 759 aa16.38■□□□□ 0.21
CTTN-201ENST00000301843 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
CTTN-201ENST00000301843 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
CTTN-201ENST00000301843 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
CTTN-201ENST00000301843 MBD3O95983 291 aa16.37■□□□□ 0.21
CTTN-201ENST00000301843 AK2P54819 239 aa16.37■□□□□ 0.21
CTTN-201ENST00000301843 TCEANC2Q96MN5 208 aa16.37■□□□□ 0.21
CTTN-201ENST00000301843 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 FLT4P35916 1363 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 TAF7Q15545 349 aaPredicted RBP16.36■□□□□ 0.21
CTTN-201ENST00000301843 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
CTTN-201ENST00000301843 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
CTTN-201ENST00000301843 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
CTTN-201ENST00000301843 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
CTTN-201ENST00000301843 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
CTTN-201ENST00000301843 RGPD8O14715 1765 aaPredicted RBP16.35■□□□□ 0.21
CTTN-201ENST00000301843 CASTP20810 708 aaKnown RBP16.35■□□□□ 0.21
CTTN-201ENST00000301843 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
CTTN-201ENST00000301843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.34■□□□□ 0.21
CTTN-201ENST00000301843 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 CCDC39Q9UFE4 941 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 KDRP35968 1356 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 ZNF500O60304 480 aaPredicted RBP16.34■□□□□ 0.21
CTTN-201ENST00000301843 ADCK5Q3MIX3 580 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
CTTN-201ENST00000301843 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
CTTN-201ENST00000301843 SYT1P21579 422 aa16.33■□□□□ 0.2
CTTN-201ENST00000301843 PIK3C2AO00443 1686 aa16.33■□□□□ 0.2
CTTN-201ENST00000301843 RPAP1Q9BWH6 1393 aaPredicted RBP16.33■□□□□ 0.2
CTTN-201ENST00000301843 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.2
CTTN-201ENST00000301843 HSPA4P34932 840 aa16.33■□□□□ 0.2
CTTN-201ENST00000301843 PTH1RQ03431 593 aa16.33■□□□□ 0.2
CTTN-201ENST00000301843 PI4K2BQ8TCG2 481 aa16.33■□□□□ 0.2
CTTN-201ENST00000301843 MCM2P49736 904 aa16.32■□□□□ 0.2
CTTN-201ENST00000301843 PDCL3Q9H2J4 239 aa16.32■□□□□ 0.2
CTTN-201ENST00000301843 IGSF1Q8N6C5 1336 aa16.32■□□□□ 0.2
CTTN-201ENST00000301843 DNM1Q05193 864 aaKnown RBP16.32■□□□□ 0.2
CTTN-201ENST00000301843 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
CTTN-201ENST00000301843 SPC24Q8NBT2 197 aa16.32■□□□□ 0.2
CTTN-201ENST00000301843 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
CTTN-201ENST00000301843 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
CTTN-201ENST00000301843 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
CTTN-201ENST00000301843 ADCY5O95622 1261 aa16.31■□□□□ 0.2
CTTN-201ENST00000301843 STAP2Q9UGK3 403 aa16.31■□□□□ 0.2
CTTN-201ENST00000301843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
CTTN-201ENST00000301843 PRAMEF22A3QJZ6 481 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 SGSM2O43147 1006 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 HOXC9P31274 260 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
CTTN-201ENST00000301843 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 XRN1Q8IZH2 1706 aaKnown RBP16.3■□□□□ 0.2
CTTN-201ENST00000301843 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
CTTN-201ENST00000301843 STX6O43752 255 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 ANAPC15P60006 121 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
CTTN-201ENST00000301843 SSH3Q8TE77 659 aa16.3■□□□□ 0.2
CTTN-201ENST00000301843 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
CTTN-201ENST00000301843 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
CTTN-201ENST00000301843 CAMK4Q16566 473 aa16.29■□□□□ 0.2
CTTN-201ENST00000301843 HS1BP3Q53T59 392 aa16.29■□□□□ 0.2
CTTN-201ENST00000301843 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
CTTN-201ENST00000301843 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms