RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.84
VPS37C-201ENST00000301765 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.84
VPS37C-201ENST00000301765 PDE1AP54750 535 aa20.32■□□□□ 0.84
VPS37C-201ENST00000301765 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
VPS37C-201ENST00000301765 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
VPS37C-201ENST00000301765 LARP6Q9BRS8 491 aaKnown RBP20.31■□□□□ 0.84
VPS37C-201ENST00000301765 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
VPS37C-201ENST00000301765 REC8O95072 547 aa20.31■□□□□ 0.84
VPS37C-201ENST00000301765 ZNF771Q7L3S4 317 aaPredicted RBP20.31■□□□□ 0.84
VPS37C-201ENST00000301765 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
VPS37C-201ENST00000301765 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
VPS37C-201ENST00000301765 GTPBP4Q9BZE4 634 aaKnown RBP20.3■□□□□ 0.84
VPS37C-201ENST00000301765 ADCY5O95622 1261 aa20.3■□□□□ 0.84
VPS37C-201ENST00000301765 UNC5CLQ8IV45 518 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 IL25Q9H293 177 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 ITSN1Q15811 1721 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
VPS37C-201ENST00000301765 LMOD2Q6P5Q4 547 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 ANO2Q9NQ90 1003 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
VPS37C-201ENST00000301765 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
VPS37C-201ENST00000301765 TRIM6-TRIM34B2RNG4 842 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 SPC24Q8NBT2 197 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 MAP4K4O95819 1239 aaPredicted RBP20.28■□□□□ 0.84
VPS37C-201ENST00000301765 HOXC9P31274 260 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 PRIMPOLQ96LW4 560 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 CRB1P82279 1406 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 HMGN5P82970 282 aaKnown RBP20.28■□□□□ 0.84
VPS37C-201ENST00000301765 PLCD3Q8N3E9 789 aa20.28■□□□□ 0.84
VPS37C-201ENST00000301765 PNMA6EA0A0J9YXQ4 647 aa20.27■□□□□ 0.84
VPS37C-201ENST00000301765 RIOK3O14730 519 aaKnown RBP20.27■□□□□ 0.84
VPS37C-201ENST00000301765 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
VPS37C-201ENST00000301765 KIF20AO95235 890 aa20.27■□□□□ 0.83
VPS37C-201ENST00000301765 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
VPS37C-201ENST00000301765 LETM1O95202 739 aaPredicted RBP20.26■□□□□ 0.83
VPS37C-201ENST00000301765 ESCO1Q5FWF5 840 aa20.26■□□□□ 0.83
VPS37C-201ENST00000301765 MBD3O95983 291 aa20.25■□□□□ 0.83
VPS37C-201ENST00000301765 ESYT1Q9BSJ8 1104 aa20.25■□□□□ 0.83
VPS37C-201ENST00000301765 NAP1L2Q9ULW6 460 aaPredicted RBP20.25■□□□□ 0.83
VPS37C-201ENST00000301765 ANXA1P04083 346 aa20.24■□□□□ 0.83
VPS37C-201ENST00000301765 LGR6Q9HBX8 967 aa20.24■□□□□ 0.83
VPS37C-201ENST00000301765 IL1RAPL2Q9NP60 686 aa20.24■□□□□ 0.83
VPS37C-201ENST00000301765 TMEM51Q9NW97 253 aa20.24■□□□□ 0.83
VPS37C-201ENST00000301765 FLT4P35916 1363 aa20.24■□□□□ 0.83
VPS37C-201ENST00000301765 PYCARDQ9ULZ3 195 aa20.24■□□□□ 0.83
VPS37C-201ENST00000301765 KIF24Q5T7B8 1368 aa20.23■□□□□ 0.83
VPS37C-201ENST00000301765 KCNQ3O43525 872 aa20.23■□□□□ 0.83
VPS37C-201ENST00000301765 NAA30Q147X3 362 aaPredicted RBP20.23■□□□□ 0.83
VPS37C-201ENST00000301765 ORAI2Q96SN7 254 aa20.23■□□□□ 0.83
VPS37C-201ENST00000301765 BRD1O95696 1058 aa20.23■□□□□ 0.83
VPS37C-201ENST00000301765 EIF2S2P20042 333 aaKnown RBP20.23■□□□□ 0.83
VPS37C-201ENST00000301765 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
VPS37C-201ENST00000301765 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
VPS37C-201ENST00000301765 PHAXQ9H814 394 aaKnown RBP20.22■□□□□ 0.83
VPS37C-201ENST00000301765 SBNO1A3KN83 1393 aa20.22■□□□□ 0.83
VPS37C-201ENST00000301765 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
VPS37C-201ENST00000301765 USP48Q86UV5 1035 aa20.21■□□□□ 0.83
VPS37C-201ENST00000301765 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
VPS37C-201ENST00000301765 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
VPS37C-201ENST00000301765 HMMRO75330 724 aa20.21■□□□□ 0.83
VPS37C-201ENST00000301765 PTPRCP08575 1304 aa20.21■□□□□ 0.83
VPS37C-201ENST00000301765 CHMLP26374 656 aa20.2■□□□□ 0.83
VPS37C-201ENST00000301765 DIP2AQ14689 1571 aa20.2■□□□□ 0.83
VPS37C-201ENST00000301765 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.83
VPS37C-201ENST00000301765 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.83
VPS37C-201ENST00000301765 MX1P20591 662 aa20.2■□□□□ 0.82
VPS37C-201ENST00000301765 GTF2F1P35269 517 aaKnown RBP eCLIP20.2■□□□□ 0.82
VPS37C-201ENST00000301765 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
VPS37C-201ENST00000301765 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
VPS37C-201ENST00000301765 PSME1Q06323 249 aa20.19■□□□□ 0.82
VPS37C-201ENST00000301765 GNAI2P04899 355 aa20.19■□□□□ 0.82
VPS37C-201ENST00000301765 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
VPS37C-201ENST00000301765 LRRCC1Q9C099 1032 aa20.19■□□□□ 0.82
VPS37C-201ENST00000301765 CHAF1AQ13111 956 aaPredicted RBP20.18■□□□□ 0.82
VPS37C-201ENST00000301765 DDX17Q92841 729 aaKnown RBP20.18■□□□□ 0.82
VPS37C-201ENST00000301765 OSBPL3Q9H4L5 887 aa20.18■□□□□ 0.82
VPS37C-201ENST00000301765 LRRFIP2Q9Y608 721 aaKnown RBP20.18■□□□□ 0.82
VPS37C-201ENST00000301765 CPA1P15085 419 aa20.17■□□□□ 0.82
VPS37C-201ENST00000301765 SALL3Q9BXA9 1300 aa20.17■□□□□ 0.82
VPS37C-201ENST00000301765 FLIIQ13045 1269 aa20.17■□□□□ 0.82
VPS37C-201ENST00000301765 ARHGAP23Q9P227 1491 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 CUL4AQ13619 759 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 GIMAP6Q6P9H5 292 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 KCNF1Q9H3M0 494 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 ARHGEF10O15013 1369 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 TOPAZ1Q8N9V7 1692 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 AP5Z1O43299 807 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 CNPY2Q9Y2B0 182 aa20.16■□□□□ 0.82
VPS37C-201ENST00000301765 CDK11BP21127 795 aaKnown RBP20.15■□□□□ 0.82
VPS37C-201ENST00000301765 CHMP3Q9Y3E7 222 aa20.15■□□□□ 0.82
VPS37C-201ENST00000301765 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
VPS37C-201ENST00000301765 KCNJ4P48050 445 aa20.14■□□□□ 0.82
VPS37C-201ENST00000301765 C16orf45Q96MC5 204 aaPredicted RBP20.14■□□□□ 0.82
VPS37C-201ENST00000301765 TRERF1Q96PN7 1200 aa20.14■□□□□ 0.82
VPS37C-201ENST00000301765 STK31Q9BXU1 1019 aa20.14■□□□□ 0.82
VPS37C-201ENST00000301765 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
VPS37C-201ENST00000301765 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms