RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
CTDP1-202ENST00000299543 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
CTDP1-202ENST00000299543 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
CTDP1-202ENST00000299543 ZSCAN20P17040 1043 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-202ENST00000299543 TEFQ10587 303 aa16.28■□□□□ 0.2
CTDP1-202ENST00000299543 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
CTDP1-202ENST00000299543 NSFL1CQ9UNZ2 370 aaKnown RBP16.28■□□□□ 0.2
CTDP1-202ENST00000299543 USP31Q70CQ4 1352 aa16.28■□□□□ 0.2
CTDP1-202ENST00000299543 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
CTDP1-202ENST00000299543 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
CTDP1-202ENST00000299543 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
CTDP1-202ENST00000299543 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
CTDP1-202ENST00000299543 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
CTDP1-202ENST00000299543 OSBPL3Q9H4L5 887 aa16.27■□□□□ 0.2
CTDP1-202ENST00000299543 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
CTDP1-202ENST00000299543 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
CTDP1-202ENST00000299543 IL25Q9H293 177 aa16.27■□□□□ 0.2
CTDP1-202ENST00000299543 ITSN1Q15811 1721 aa16.27■□□□□ 0.2
CTDP1-202ENST00000299543 PSME1Q06323 249 aa16.27■□□□□ 0.19
CTDP1-202ENST00000299543 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.19
CTDP1-202ENST00000299543 RBSNQ9H1K0 784 aa16.27■□□□□ 0.19
CTDP1-202ENST00000299543 TBX22Q9Y458 520 aa16.27■□□□□ 0.19
CTDP1-202ENST00000299543 C3P01024 1663 aa16.26■□□□□ 0.19
CTDP1-202ENST00000299543 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
CTDP1-202ENST00000299543 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
CTDP1-202ENST00000299543 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
CTDP1-202ENST00000299543 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
CTDP1-202ENST00000299543 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.26■□□□□ 0.19
CTDP1-202ENST00000299543 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
CTDP1-202ENST00000299543 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
CTDP1-202ENST00000299543 DMTNQ08495 405 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 PPP4R3BQ5MIZ7 849 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
CTDP1-202ENST00000299543 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
CTDP1-202ENST00000299543 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
CTDP1-202ENST00000299543 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
CTDP1-202ENST00000299543 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
CTDP1-202ENST00000299543 CPA1P15085 419 aa16.24■□□□□ 0.19
CTDP1-202ENST00000299543 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
CTDP1-202ENST00000299543 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
CTDP1-202ENST00000299543 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
CTDP1-202ENST00000299543 BTBD11A6QL63 1104 aa16.23■□□□□ 0.19
CTDP1-202ENST00000299543 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
CTDP1-202ENST00000299543 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-202ENST00000299543 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
CTDP1-202ENST00000299543 CLEC17AQ6ZS10 378 aa16.23■□□□□ 0.19
CTDP1-202ENST00000299543 KDRP35968 1356 aa16.22■□□□□ 0.19
CTDP1-202ENST00000299543 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
CTDP1-202ENST00000299543 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
CTDP1-202ENST00000299543 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
CTDP1-202ENST00000299543 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
CTDP1-202ENST00000299543 MCM2P49736 904 aa16.21■□□□□ 0.19
CTDP1-202ENST00000299543 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 KCNJ4P48050 445 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 KIF1BPQ96EK5 621 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 ZNF445P59923 1031 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 ATP2B3Q16720 1220 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 SSH3Q8TE77 659 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
CTDP1-202ENST00000299543 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
CTDP1-202ENST00000299543 ZNF830Q96NB3 372 aaPredicted RBP16.2■□□□□ 0.18
CTDP1-202ENST00000299543 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
CTDP1-202ENST00000299543 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 CWF19L2Q2TBE0 894 aaKnown RBP16.19■□□□□ 0.18
CTDP1-202ENST00000299543 CNTROBQ8N137 903 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 REREQ9P2R6 1566 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 PRAMEF22A3QJZ6 481 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 GADD45BO75293 160 aaPredicted RBP16.19■□□□□ 0.18
CTDP1-202ENST00000299543 C1orf141Q5JVX7 400 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 TMEM51Q9NW97 253 aa16.19■□□□□ 0.18
CTDP1-202ENST00000299543 SIL1Q9H173 461 aa16.18■□□□□ 0.18
CTDP1-202ENST00000299543 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
CTDP1-202ENST00000299543 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
CTDP1-202ENST00000299543 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
CTDP1-202ENST00000299543 BRD1O95696 1058 aa16.18■□□□□ 0.18
CTDP1-202ENST00000299543 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
CTDP1-202ENST00000299543 CLASRPQ8N2M8 674 aaKnown RBP16.18■□□□□ 0.18
CTDP1-202ENST00000299543 C17orf53Q8N3J3 647 aaPredicted RBP16.18■□□□□ 0.18
CTDP1-202ENST00000299543 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
CTDP1-202ENST00000299543 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
CTDP1-202ENST00000299543 CCDC94Q9BW85 323 aaPredicted RBP16.17■□□□□ 0.18
CTDP1-202ENST00000299543 RAB11FIP3O75154 756 aa16.17■□□□□ 0.18
CTDP1-202ENST00000299543 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
CTDP1-202ENST00000299543 PROSER3Q2NL68 480 aa16.17■□□□□ 0.18
CTDP1-202ENST00000299543 IP6K1Q92551 441 aa16.17■□□□□ 0.18
CTDP1-202ENST00000299543 ANAPC15P60006 121 aa16.16■□□□□ 0.18
CTDP1-202ENST00000299543 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
CTDP1-202ENST00000299543 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
CTDP1-202ENST00000299543 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
CTDP1-202ENST00000299543 FIBPO43427 364 aa16.16■□□□□ 0.18
CTDP1-202ENST00000299543 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
CTDP1-202ENST00000299543 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
CTDP1-202ENST00000299543 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms