RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 ATP8B2P98198 1209 aa16.54■□□□□ 0.24
TTC39B-201ENST00000297615 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
TTC39B-201ENST00000297615 SNX21Q969T3 373 aa16.54■□□□□ 0.24
TTC39B-201ENST00000297615 GRPEL1Q9HAV7 217 aa16.54■□□□□ 0.24
TTC39B-201ENST00000297615 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
TTC39B-201ENST00000297615 MPNDQ8N594 471 aa16.52■□□□□ 0.24
TTC39B-201ENST00000297615 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.23
TTC39B-201ENST00000297615 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.23
TTC39B-201ENST00000297615 MYD88Q99836 296 aa16.52■□□□□ 0.23
TTC39B-201ENST00000297615 ITSN1Q15811 1721 aa16.52■□□□□ 0.23
TTC39B-201ENST00000297615 GOLGA6L22H0YM25 854 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 NAP1L5Q96NT1 182 aaPredicted RBP16.51■□□□□ 0.23
TTC39B-201ENST00000297615 ERC2O15083 957 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
TTC39B-201ENST00000297615 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 C3P01024 1663 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
TTC39B-201ENST00000297615 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
TTC39B-201ENST00000297615 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
TTC39B-201ENST00000297615 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
TTC39B-201ENST00000297615 FAM43AQ8N2R8 423 aa16.5■□□□□ 0.23
TTC39B-201ENST00000297615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 GIGYF1O75420 1035 aaPredicted RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 AKAP4Q5JQC9 854 aa16.49■□□□□ 0.23
TTC39B-201ENST00000297615 TRIM44Q96DX7 344 aaPredicted RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 RABEP1Q15276 862 aa16.49■□□□□ 0.23
TTC39B-201ENST00000297615 AACSQ86V21 672 aa16.49■□□□□ 0.23
TTC39B-201ENST00000297615 TLR7Q9NYK1 1049 aaKnown RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 ST18O60284 1047 aa16.49■□□□□ 0.23
TTC39B-201ENST00000297615 BAG4O95429 457 aaKnown RBP16.49■□□□□ 0.23
TTC39B-201ENST00000297615 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
TTC39B-201ENST00000297615 PRDM11Q9NQV5 511 aa16.49■□□□□ 0.23
TTC39B-201ENST00000297615 KDRP35968 1356 aa16.48■□□□□ 0.23
TTC39B-201ENST00000297615 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
TTC39B-201ENST00000297615 KCNJ4P48050 445 aa16.48■□□□□ 0.23
TTC39B-201ENST00000297615 COL9A3Q14050 684 aaPredicted RBP16.48■□□□□ 0.23
TTC39B-201ENST00000297615 BEND3Q5T5X7 828 aa16.48■□□□□ 0.23
TTC39B-201ENST00000297615 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
TTC39B-201ENST00000297615 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
TTC39B-201ENST00000297615 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 MRE11P49959 708 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 TMEM94Q12767 1356 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 REC8O95072 547 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 TATP17735 454 aaPredicted RBP16.47■□□□□ 0.23
TTC39B-201ENST00000297615 CHMLP26374 656 aa16.47■□□□□ 0.23
TTC39B-201ENST00000297615 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
TTC39B-201ENST00000297615 DDIT3P35638 169 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 KNDC1Q76NI1 1749 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 A1BGP04217 495 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
TTC39B-201ENST00000297615 FOSBP53539 338 aa16.46■□□□□ 0.23
TTC39B-201ENST00000297615 PXDNQ92626 1479 aa16.45■□□□□ 0.22
TTC39B-201ENST00000297615 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
TTC39B-201ENST00000297615 CABP4P57796 275 aa16.45■□□□□ 0.22
TTC39B-201ENST00000297615 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
TTC39B-201ENST00000297615 EVA1CP58658 441 aa16.44■□□□□ 0.22
TTC39B-201ENST00000297615 CYP27B1O15528 508 aa16.44■□□□□ 0.22
TTC39B-201ENST00000297615 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
TTC39B-201ENST00000297615 CIZ1Q9ULV3 898 aaPredicted RBP16.44■□□□□ 0.22
TTC39B-201ENST00000297615 NEUROD6Q96NK8 337 aa16.43■□□□□ 0.22
TTC39B-201ENST00000297615 FER1L4A9Z1Z3 1794 aa16.43■□□□□ 0.22
TTC39B-201ENST00000297615 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
TTC39B-201ENST00000297615 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
TTC39B-201ENST00000297615 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
TTC39B-201ENST00000297615 FAM227BQ96M60 508 aa16.43■□□□□ 0.22
TTC39B-201ENST00000297615 NPHP4O75161 1426 aaPredicted RBP16.42■□□□□ 0.22
TTC39B-201ENST00000297615 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
TTC39B-201ENST00000297615 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
TTC39B-201ENST00000297615 ERBB3P21860 1342 aa16.42■□□□□ 0.22
TTC39B-201ENST00000297615 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
TTC39B-201ENST00000297615 STK3Q13188 491 aa16.42■□□□□ 0.22
TTC39B-201ENST00000297615 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
TTC39B-201ENST00000297615 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
TTC39B-201ENST00000297615 DIAPH3Q9NSV4 1193 aa16.42■□□□□ 0.22
TTC39B-201ENST00000297615 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
TTC39B-201ENST00000297615 ADCY9O60503 1353 aa16.41■□□□□ 0.22
TTC39B-201ENST00000297615 ARHGAP23Q9P227 1491 aa16.41■□□□□ 0.22
TTC39B-201ENST00000297615 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
TTC39B-201ENST00000297615 ZNF594Q96JF6 807 aaPredicted RBP16.41■□□□□ 0.22
TTC39B-201ENST00000297615 PTH1RQ03431 593 aa16.41■□□□□ 0.22
TTC39B-201ENST00000297615 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
TTC39B-201ENST00000297615 KIAA1211Q6ZU35 1233 aa16.41■□□□□ 0.22
TTC39B-201ENST00000297615 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
TTC39B-201ENST00000297615 KDM4AO75164 1064 aa16.4■□□□□ 0.22
TTC39B-201ENST00000297615 TTLL7Q6ZT98 887 aa16.4■□□□□ 0.22
TTC39B-201ENST00000297615 NECAB1Q8N987 351 aa16.4■□□□□ 0.22
TTC39B-201ENST00000297615 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
TTC39B-201ENST00000297615 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
TTC39B-201ENST00000297615 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms