RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.56
CAPN2-201ENST00000295006 TNRQ92752 1358 aa18.52■□□□□ 0.56
CAPN2-201ENST00000295006 PIK3C2BO00750 1634 aa18.52■□□□□ 0.55
CAPN2-201ENST00000295006 NEO1Q92859 1461 aa18.52■□□□□ 0.55
CAPN2-201ENST00000295006 AK2P54819 239 aa18.51■□□□□ 0.55
CAPN2-201ENST00000295006 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
CAPN2-201ENST00000295006 FAM173BQ6P4H8 233 aa18.51■□□□□ 0.55
CAPN2-201ENST00000295006 C17orf53Q8N3J3 647 aaPredicted RBP18.51■□□□□ 0.55
CAPN2-201ENST00000295006 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
CAPN2-201ENST00000295006 TFIP11Q9UBB9 837 aaKnown RBP18.51■□□□□ 0.55
CAPN2-201ENST00000295006 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
CAPN2-201ENST00000295006 ATP6V1DQ9Y5K8 247 aa18.51■□□□□ 0.55
CAPN2-201ENST00000295006 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
CAPN2-201ENST00000295006 NLRP2Q9NX02 1062 aa18.51■□□□□ 0.55
CAPN2-201ENST00000295006 CYP46A1Q9Y6A2 500 aa18.51■□□□□ 0.55
CAPN2-201ENST00000295006 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
CAPN2-201ENST00000295006 ARHGEF28Q8N1W1 1705 aaKnown RBP18.5■□□□□ 0.55
CAPN2-201ENST00000295006 TPM2P07951 284 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 HOXC9P31274 260 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 FLT4P35916 1363 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 ZNF445P59923 1031 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 BICD2Q8TD16 824 aa18.5■□□□□ 0.55
CAPN2-201ENST00000295006 CPS1P31327 1500 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 STX6O43752 255 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 UBE2Q2Q8WVN8 375 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 KCNA6P17658 529 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 TSPOAP1O95153 1857 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
CAPN2-201ENST00000295006 GJB2P29033 226 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 LIMCH1Q9UPQ0 1083 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 MED14O60244 1454 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
CAPN2-201ENST00000295006 AATKQ6ZMQ8 1374 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 MAP2P11137 1827 aaKnown RBP18.48■□□□□ 0.55
CAPN2-201ENST00000295006 ATP7BP35670 1465 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 H3BQV1 296 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 RRP9O43818 475 aaKnown RBP18.48■□□□□ 0.55
CAPN2-201ENST00000295006 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
CAPN2-201ENST00000295006 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 IFFO2Q5TF58 517 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 ARHGAP31Q2M1Z3 1444 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 IL25Q9H293 177 aa18.48■□□□□ 0.55
CAPN2-201ENST00000295006 CKAP2LQ8IYA6 745 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 RASEFQ8IZ41 740 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 SOS1Q07889 1333 aaPredicted RBP18.47■□□□□ 0.55
CAPN2-201ENST00000295006 RAB11FIP3O75154 756 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 NEXNQ0ZGT2 675 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 KDM4AO75164 1064 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
CAPN2-201ENST00000295006 GLRX3O76003 335 aaKnown RBP18.46■□□□□ 0.55
CAPN2-201ENST00000295006 PLEKHO1Q53GL0 409 aaPredicted RBP18.46■□□□□ 0.55
CAPN2-201ENST00000295006 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
CAPN2-201ENST00000295006 KIAA0232Q92628 1395 aa18.46■□□□□ 0.55
CAPN2-201ENST00000295006 SYT1P21579 422 aa18.46■□□□□ 0.55
CAPN2-201ENST00000295006 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
CAPN2-201ENST00000295006 ADCY5O95622 1261 aa18.46■□□□□ 0.55
CAPN2-201ENST00000295006 BRD1O95696 1058 aa18.46■□□□□ 0.55
CAPN2-201ENST00000295006 FAM184AQ8NB25 1140 aa18.45■□□□□ 0.54
CAPN2-201ENST00000295006 TSC1Q92574 1164 aa18.45■□□□□ 0.54
CAPN2-201ENST00000295006 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
CAPN2-201ENST00000295006 PLEKHG3A1L390 1219 aa18.45■□□□□ 0.54
CAPN2-201ENST00000295006 CHAF1AQ13111 956 aaPredicted RBP18.45■□□□□ 0.54
CAPN2-201ENST00000295006 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
CAPN2-201ENST00000295006 SNX14Q9Y5W7 946 aa18.45■□□□□ 0.54
CAPN2-201ENST00000295006 ZKSCAN5Q9Y2L8 839 aa18.45■□□□□ 0.54
CAPN2-201ENST00000295006 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 PPP1R9BQ96SB3 815 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 LRRC2Q9BYS8 371 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 DIP2CQ9Y2E4 1556 aa18.44■□□□□ 0.54
CAPN2-201ENST00000295006 PRAMEF22A3QJZ6 481 aa18.43■□□□□ 0.54
CAPN2-201ENST00000295006 DDX58O95786 925 aaKnown RBP18.43■□□□□ 0.54
CAPN2-201ENST00000295006 ZSCAN22P10073 491 aaPredicted RBP18.43■□□□□ 0.54
CAPN2-201ENST00000295006 ECHDC1Q9NTX5 307 aa18.43■□□□□ 0.54
CAPN2-201ENST00000295006 OFD1O75665 1012 aa18.43■□□□□ 0.54
CAPN2-201ENST00000295006 ZRSR1Q15695 479 aaKnown RBP18.43■□□□□ 0.54
CAPN2-201ENST00000295006 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
CAPN2-201ENST00000295006 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
CAPN2-201ENST00000295006 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
CAPN2-201ENST00000295006 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
CAPN2-201ENST00000295006 CPSF1Q10570 1443 aaKnown RBP18.42■□□□□ 0.54
CAPN2-201ENST00000295006 SIGLEC1Q9BZZ2 1709 aa18.42■□□□□ 0.54
CAPN2-201ENST00000295006 ANAPC15P60006 121 aa18.42■□□□□ 0.54
CAPN2-201ENST00000295006 PTH1RQ03431 593 aa18.42■□□□□ 0.54
CAPN2-201ENST00000295006 CCDC183Q5T5S1 534 aa18.42■□□□□ 0.54
CAPN2-201ENST00000295006 SGSM2O43147 1006 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
CAPN2-201ENST00000295006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
CAPN2-201ENST00000295006 ATP5J2-PTCD1G3V325 749 aa18.41■□□□□ 0.54
CAPN2-201ENST00000295006 PTCD1O75127 700 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms