RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 RNF41Q9H4P4 317 aaPredicted RBP9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 U3KPZ7 1027 aaPredicted RBP9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 UQCRFS1P1P0C7P4 283 aa9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 MTHFSDQ2M296 383 aaKnown RBP9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 TRIM27P14373 513 aa9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 FOSBP53539 338 aa9.31□□□□□ -0.92
NCKAP1L-201ENST00000293373 POLD1P28340 1107 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 DEKP35659 375 aaKnown RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 ATP2B2Q01814 1243 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 ERVK-7P63135 1459 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 PLEKHG3A1L390 1219 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 BLOC1S2Q6QNY1 142 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 USP5P45974 858 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 UTP14AQ9BVJ6 771 aaKnown RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 EXOC6BQ9Y2D4 811 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 SHROOM2Q13796 1616 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 MAP4K4O95819 1239 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 FOXD4L6Q3SYB3 417 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 CRACR2BQ8N4Y2 399 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 STK38Q15208 465 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 KSR2Q6VAB6 950 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 MBD3O95983 291 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 HMGB1P09429 215 aaKnown RBP9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 BTG4Q9NY30 223 aa9.3□□□□□ -0.92
NCKAP1L-201ENST00000293373 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 F6X3S4 739 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 NUP133Q8WUM0 1156 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 CHPF2Q9P2E5 772 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 R3HCC1Q9Y3T6 440 aaKnown RBP9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 GPTP24298 496 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 SPINK5Q9NQ38 1064 aaPredicted RBP9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 MAP3K19Q56UN5 1328 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 POLR3DP05423 398 aaPredicted RBP9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 ADCY10Q96PN6 1610 aa9.29□□□□□ -0.92
NCKAP1L-201ENST00000293373 RNMTO43148 476 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 UBE3BQ7Z3V4 1068 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 EVI5LQ96CN4 794 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 EYA1Q99502 592 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 ECHDC1Q9NTX5 307 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 WDR33Q9C0J8 1336 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 PI4KAP2A4QPH2 592 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 HOXB7P09629 217 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 PI4KAP1Q8N8J0 262 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 ZGPATQ8N5A5 531 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 KRT18P05783 430 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 XAGE3Q8WTP9 111 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 JAKMIP1Q96N16 626 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 RTL1A6NKG5 1358 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 KINO60870 393 aaKnown RBP9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 BAG3O95817 575 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 CCDC70Q6NSX1 233 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 PTPRTO14522 1441 aa9.28□□□□□ -0.92
NCKAP1L-201ENST00000293373 ZNF804AQ7Z570 1209 aa9.27□□□□□ -0.92
NCKAP1L-201ENST00000293373 ACSBG1Q96GR2 724 aa9.27□□□□□ -0.92
NCKAP1L-201ENST00000293373 SEC63Q9UGP8 760 aaKnown RBP9.27□□□□□ -0.92
NCKAP1L-201ENST00000293373 RTCBQ9Y3I0 505 aaKnown RBP9.27□□□□□ -0.92
NCKAP1L-201ENST00000293373 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 ABCC3O15438 1527 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 K7ELQ4 463 aaPredicted RBP9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 ANKRD18AQ8IVF6 992 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 NAPBQ9H115 298 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 INSRP06213 1382 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 ARHGAP31Q2M1Z3 1444 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 CCDC196A0A1B0GTZ2 297 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 C6orf229H3BNL8 230 aa9.27□□□□□ -0.93
NCKAP1L-201ENST00000293373 LTKP29376 864 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 TPTE2Q6XPS3 522 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 LDHAL6AQ6ZMR3 332 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 ANKRD2Q9GZV1 360 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 MYO1BO43795 1136 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 STK32BQ9NY57 414 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 CLASP1Q7Z460 1538 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 ZNF622Q969S3 477 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■□□□□ 9.2
NCKAP1L-201ENST00000293373 SDF4Q9BRK5 362 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 FAM13BQ9NYF5 915 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 EPS15P42566 896 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 CCDC178Q5BJE1 867 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 MPHOSPH10O00566 681 aaKnown RBP9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 ORAI2Q96SN7 254 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 HDAC9Q9UKV0 1011 aa9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 IL15P40933 162 aaPredicted RBP9.26□□□□□ -0.93
NCKAP1L-201ENST00000293373 HLA-DOAP06340 250 aa9.25□□□□□ -0.93
NCKAP1L-201ENST00000293373 A0A0U1RQG5 324 aaPredicted RBP9.25□□□□□ -0.93
NCKAP1L-201ENST00000293373 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms