RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 TTLL6Q8N841 843 aa14.39□□□□□ -0.11
USP41-201ENST00000292729 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
USP41-201ENST00000292729 C1orf141Q5JVX7 400 aa14.38□□□□□ -0.11
USP41-201ENST00000292729 USPL1Q5W0Q7 1092 aa14.38□□□□□ -0.11
USP41-201ENST00000292729 INTS5Q6P9B9 1019 aaKnown RBP14.38□□□□□ -0.11
USP41-201ENST00000292729 NFATC2IPQ8NCF5 419 aa14.38□□□□□ -0.11
USP41-201ENST00000292729 POTECB2RU33 542 aa14.37□□□□□ -0.11
USP41-201ENST00000292729 PRDM10Q9NQV6 1147 aa14.37□□□□□ -0.11
USP41-201ENST00000292729 FER1L6Q2WGJ9 1857 aa14.37□□□□□ -0.11
USP41-201ENST00000292729 H0YIN7 160 aa14.36□□□□□ -0.11
USP41-201ENST00000292729 SLC34A2O95436 690 aa14.36□□□□□ -0.11
USP41-201ENST00000292729 NARFQ9UHQ1 456 aa14.36□□□□□ -0.11
USP41-201ENST00000292729 SOS1Q07889 1333 aaPredicted RBP14.36□□□□□ -0.11
USP41-201ENST00000292729 NFKBIEO00221 500 aa14.35□□□□□ -0.11
USP41-201ENST00000292729 SERPINB2P05120 415 aa14.35□□□□□ -0.11
USP41-201ENST00000292729 NFIXQ14938 502 aa14.35□□□□□ -0.11
USP41-201ENST00000292729 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
USP41-201ENST00000292729 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
USP41-201ENST00000292729 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
USP41-201ENST00000292729 VIRMAQ69YN4 1812 aaKnown RBP14.35□□□□□ -0.11
USP41-201ENST00000292729 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
USP41-201ENST00000292729 COL15A1P39059 1388 aa14.34□□□□□ -0.11
USP41-201ENST00000292729 FOXN1O15353 648 aa14.33□□□□□ -0.12
USP41-201ENST00000292729 ERFEQ4G0M1 354 aa14.33□□□□□ -0.12
USP41-201ENST00000292729 DNAJC10Q8IXB1 793 aa14.33□□□□□ -0.12
USP41-201ENST00000292729 SCN4AP35499 1836 aa14.33□□□□□ -0.12
USP41-201ENST00000292729 CNTNAP1P78357 1384 aa14.33□□□□□ -0.12
USP41-201ENST00000292729 ANKRD31Q8N7Z5 1873 aa14.32□□□□□ -0.12
USP41-201ENST00000292729 TNNT2P45379 298 aaPredicted RBP14.32□□□□□ -0.12
USP41-201ENST00000292729 CTCFP49711 727 aaPredicted RBP14.32□□□□□ -0.12
USP41-201ENST00000292729 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
USP41-201ENST00000292729 CYP19A1P11511 503 aaPredicted RBP14.31□□□□□ -0.12
USP41-201ENST00000292729 LTBP3Q9NS15 1303 aa14.31□□□□□ -0.12
USP41-201ENST00000292729 SLC52A2Q9HAB3 445 aa14.3□□□□□ -0.12
USP41-201ENST00000292729 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
USP41-201ENST00000292729 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 PDE6BP35913 854 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 MRC1P22897 1456 aa14.29□□□□□ -0.12
USP41-201ENST00000292729 C21orf2O43822 256 aa14.28□□□□□ -0.12
USP41-201ENST00000292729 COL11A2P13942 1736 aaPredicted RBP14.28□□□□□ -0.12
USP41-201ENST00000292729 LDHDQ86WU2 507 aa14.28□□□□□ -0.12
USP41-201ENST00000292729 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
USP41-201ENST00000292729 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP41-201ENST00000292729 BRIP1Q9BX63 1249 aa14.28□□□□□ -0.12
USP41-201ENST00000292729 TAOK3Q9H2K8 898 aa14.28□□□□□ -0.12
USP41-201ENST00000292729 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
USP41-201ENST00000292729 UBR2Q8IWV8 1755 aa14.27□□□□□ -0.12
USP41-201ENST00000292729 A0A087WZG4 1122 aa14.27□□□□□ -0.13
USP41-201ENST00000292729 TMEM88BA6NKF7 163 aa14.27□□□□□ -0.13
USP41-201ENST00000292729 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
USP41-201ENST00000292729 SOGA3Q5TF21 947 aa14.27□□□□□ -0.13
USP41-201ENST00000292729 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
USP41-201ENST00000292729 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
USP41-201ENST00000292729 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
USP41-201ENST00000292729 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
USP41-201ENST00000292729 SCN7AQ01118 1682 aa14.26□□□□□ -0.13
USP41-201ENST00000292729 SLX4Q8IY92 1834 aa14.25□□□□□ -0.13
USP41-201ENST00000292729 VEGFBP49765 207 aa14.25□□□□□ -0.13
USP41-201ENST00000292729 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
USP41-201ENST00000292729 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
USP41-201ENST00000292729 RNMTO43148 476 aaKnown RBP14.24□□□□□ -0.13
USP41-201ENST00000292729 STARD3NLO95772 234 aa14.24□□□□□ -0.13
USP41-201ENST00000292729 LBX1P52954 281 aa14.24□□□□□ -0.13
USP41-201ENST00000292729 EIF5P55010 431 aaKnown RBP14.24□□□□□ -0.13
USP41-201ENST00000292729 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
USP41-201ENST00000292729 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
USP41-201ENST00000292729 TAF1DQ9H5J8 278 aaPredicted RBP14.24□□□□□ -0.13
USP41-201ENST00000292729 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
USP41-201ENST00000292729 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
USP41-201ENST00000292729 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
USP41-201ENST00000292729 CANXP27824 592 aaKnown RBP14.23□□□□□ -0.13
USP41-201ENST00000292729 STYK1Q6J9G0 422 aa14.23□□□□□ -0.13
USP41-201ENST00000292729 PRR5LQ6MZQ0 368 aa14.23□□□□□ -0.13
USP41-201ENST00000292729 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
USP41-201ENST00000292729 LGR6Q9HBX8 967 aa14.23□□□□□ -0.13
USP41-201ENST00000292729 ADAMTSL1Q8N6G6 1762 aa14.22□□□□□ -0.13
USP41-201ENST00000292729 MAP2K1Q02750 393 aaPredicted RBP14.22□□□□□ -0.13
USP41-201ENST00000292729 TBC1D9BQ66K14 1250 aa14.22□□□□□ -0.13
USP41-201ENST00000292729 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
USP41-201ENST00000292729 IL13P35225 146 aa14.21□□□□□ -0.13
USP41-201ENST00000292729 DEFB115Q30KQ5 88 aa14.21□□□□□ -0.13
USP41-201ENST00000292729 FAM161AQ3B820 660 aa14.21□□□□□ -0.13
USP41-201ENST00000292729 MASTLQ96GX5 879 aa14.21□□□□□ -0.13
USP41-201ENST00000292729 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
USP41-201ENST00000292729 SRGNP10124 158 aa14.2□□□□□ -0.14
USP41-201ENST00000292729 HSPA8P11142 646 aaKnown RBP14.2□□□□□ -0.14
USP41-201ENST00000292729 ST5P78524 1137 aa14.2□□□□□ -0.14
USP41-201ENST00000292729 PRPF40BQ6NWY9 871 aaKnown RBP14.2□□□□□ -0.14
USP41-201ENST00000292729 PNMA8AQ86V59 439 aaPredicted RBP14.2□□□□□ -0.14
USP41-201ENST00000292729 MORC1Q86VD1 984 aa14.2□□□□□ -0.14
USP41-201ENST00000292729 TTC5Q8N0Z6 440 aa14.2□□□□□ -0.14
USP41-201ENST00000292729 POLR3GLQ9BT43 218 aa14.2□□□□□ -0.14
USP41-201ENST00000292729 NPHP1O15259 732 aa14.19□□□□□ -0.14
USP41-201ENST00000292729 IL6STP40189 918 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms