RNA–Protein interactions for RNA: ENST00000291503.9

ATP13A1-201, Transcript of ATPase 13A1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP13A1, Length 3,483 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-201ENST00000291503 ZNF330Q9Y3S2 320 aaPredicted RBP13.29□□□□□ -0.28
ATP13A1-201ENST00000291503 FGD1P98174 961 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 ATP10DQ9P241 1426 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 RNF214Q8ND24 703 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 GDPD2Q9HCC8 539 aa13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 CWC22Q9HCG8 908 aaKnown RBP13.28□□□□□ -0.28
ATP13A1-201ENST00000291503 CNTROBQ8N137 903 aa13.27□□□□□ -0.28
ATP13A1-201ENST00000291503 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.28
ATP13A1-201ENST00000291503 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.28
ATP13A1-201ENST00000291503 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.28
ATP13A1-201ENST00000291503 PDE4CQ08493 712 aa13.27□□□□□ -0.28
ATP13A1-201ENST00000291503 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
ATP13A1-201ENST00000291503 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.29
ATP13A1-201ENST00000291503 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 AACSQ86V21 672 aa13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
ATP13A1-201ENST00000291503 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 CPA1P15085 419 aa13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
ATP13A1-201ENST00000291503 RGS12O14924 1447 aa13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 PTMAP06454 111 aaKnown RBP13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 AKAP4Q5JQC9 854 aa13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 A0A0G2JS52 829 aa13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 TPM2P07951 284 aa13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 PDCL3Q9H2J4 239 aa13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
ATP13A1-201ENST00000291503 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 KLHL40Q2TBA0 621 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 SYCE3A1L190 88 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 ATF3P18847 181 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 BOLA2Q9H3K6 86 aa13.23□□□□□ -0.29
ATP13A1-201ENST00000291503 MSNP26038 577 aaKnown RBP13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 DDIT3P35638 169 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 MCM2P49736 904 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 MPNDQ8N594 471 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 NAP1L2Q9ULW6 460 aaPredicted RBP13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 KDRP35968 1356 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 PRPF40BQ6NWY9 871 aaKnown RBP13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
ATP13A1-201ENST00000291503 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
ATP13A1-201ENST00000291503 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.3
ATP13A1-201ENST00000291503 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.3
ATP13A1-201ENST00000291503 FSD1Q9BTV5 496 aa13.21□□□□□ -0.3
ATP13A1-201ENST00000291503 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 MYD88Q99836 296 aa13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 R3HCC1Q9Y3T6 440 aaKnown RBP13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
ATP13A1-201ENST00000291503 KSR2Q6VAB6 950 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 IL25Q9H293 177 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 FIBPO43427 364 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
ATP13A1-201ENST00000291503 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 ISY1Q9ULR0 285 aaKnown RBP13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
ATP13A1-201ENST00000291503 GRM8O00222 908 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms