RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 TMEM57Q8N5G2 664 aa12.86□□□□□ -0.35
PREX2-201ENST00000288368 KDM5AP29375 1690 aaKnown RBP12.85□□□□□ -0.35
PREX2-201ENST00000288368 A0A087WZG4 1122 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
PREX2-201ENST00000288368 MAP2K1Q02750 393 aaPredicted RBP12.85□□□□□ -0.35
PREX2-201ENST00000288368 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
PREX2-201ENST00000288368 CFAP43Q8NDM7 1665 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 TROQ12816 1431 aaPredicted RBP12.85□□□□□ -0.35
PREX2-201ENST00000288368 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 STAMBPO95630 424 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 CEP63Q96MT8 703 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
PREX2-201ENST00000288368 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
PREX2-201ENST00000288368 NCAPD3P42695 1498 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 RAPGEF6Q8TEU7 1601 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 LIG1P18858 919 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 EXOC6BQ9Y2D4 811 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 UBE4AQ14139 1066 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 PSMD1Q99460 953 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
PREX2-201ENST00000288368 HOOK3Q86VS8 718 aa12.84□□□□□ -0.35
PREX2-201ENST00000288368 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
PREX2-201ENST00000288368 SHTN1A0MZ66 631 aa12.83□□□□□ -0.35
PREX2-201ENST00000288368 IFIT5Q13325 482 aaKnown RBP12.83□□□□□ -0.35
PREX2-201ENST00000288368 FERMT2Q96AC1 680 aa12.83□□□□□ -0.35
PREX2-201ENST00000288368 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.35
PREX2-201ENST00000288368 C8orf76Q96K31 380 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 USP8P40818 1118 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 NFE2L2Q16236 605 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 TMEM87AQ8NBN3 555 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 DUSP27Q5VZP5 1158 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 MCM3P25205 808 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
PREX2-201ENST00000288368 CCDC196A0A1B0GTZ2 297 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 CTNNA2P26232 953 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 CATIPQ7Z7H3 387 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 GIMAP7Q8NHV1 300 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 COMMD10Q9Y6G5 202 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 FERMT3Q86UX7 667 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 CTCFLQ8NI51 663 aaPredicted RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 RAB34Q9BZG1 259 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 SPTY2D1Q68D10 685 aaPredicted RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 KIF2AO00139 706 aaPredicted RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 MYD88Q99836 296 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 SLC4A8Q2Y0W8 1093 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 TOP1P11387 765 aaKnown RBP12.82□□□□□ -0.36
PREX2-201ENST00000288368 BACH2Q9BYV9 841 aa12.82□□□□□ -0.36
PREX2-201ENST00000288368 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
PREX2-201ENST00000288368 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 UBXN4Q92575 508 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
PREX2-201ENST00000288368 NAIPQ13075 1403 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 FCHSD2O94868 740 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
PREX2-201ENST00000288368 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
PREX2-201ENST00000288368 FEZ1Q99689 392 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
PREX2-201ENST00000288368 ADGRL1O94910 1474 aa12.81□□□□□ -0.36
PREX2-201ENST00000288368 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
PREX2-201ENST00000288368 CCDC194A0A1B0GVG4 234 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 STX1AQ16623 288 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 ZC3H6P61129 1189 aaKnown RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 PDCL2Q8N4E4 241 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 BOLA2Q9H3K6 86 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 SLC52A1Q9NWF4 448 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 PTPN14Q15678 1187 aa12.8□□□□□ -0.36
PREX2-201ENST00000288368 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
PREX2-201ENST00000288368 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
PREX2-201ENST00000288368 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
PREX2-201ENST00000288368 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
PREX2-201ENST00000288368 SYCP3Q8IZU3 236 aa12.79□□□□□ -0.36
PREX2-201ENST00000288368 CCDC82Q8N4S0 544 aa12.79□□□□□ -0.36
PREX2-201ENST00000288368 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
PREX2-201ENST00000288368 KIF18AQ8NI77 898 aa12.78□□□□□ -0.36
PREX2-201ENST00000288368 SCAND2PQ9GZW5 306 aaPredicted RBP12.78□□□□□ -0.36
PREX2-201ENST00000288368 HMGB2P26583 209 aaKnown RBP12.78□□□□□ -0.36
PREX2-201ENST00000288368 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
PREX2-201ENST00000288368 SAMM50Q9Y512 469 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms