RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
ZIC3-201ENST00000287538 SIL1Q9H173 461 aa15.77■□□□□ 0.11
ZIC3-201ENST00000287538 RTL1A6NKG5 1358 aa15.77■□□□□ 0.11
ZIC3-201ENST00000287538 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 FMN2Q9NZ56 1722 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 TBC1D9Q6ZT07 1266 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
ZIC3-201ENST00000287538 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 GAS2L3Q86XJ1 694 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 PLEKHM2Q8IWE5 1019 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
ZIC3-201ENST00000287538 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
ZIC3-201ENST00000287538 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
ZIC3-201ENST00000287538 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
ZIC3-201ENST00000287538 ATP5J2-PTCD1G3V325 749 aa15.75■□□□□ 0.11
ZIC3-201ENST00000287538 NOL8Q76FK4 1167 aaKnown RBP15.75■□□□□ 0.11
ZIC3-201ENST00000287538 USP16Q9Y5T5 823 aa15.75■□□□□ 0.11
ZIC3-201ENST00000287538 DBF4Q9UBU7 674 aaPredicted RBP15.75■□□□□ 0.11
ZIC3-201ENST00000287538 GIGYF1O75420 1035 aaPredicted RBP15.74■□□□□ 0.11
ZIC3-201ENST00000287538 LARP1Q6PKG0 1096 aaKnown RBP15.74■□□□□ 0.11
ZIC3-201ENST00000287538 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
ZIC3-201ENST00000287538 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
ZIC3-201ENST00000287538 CYP27B1O15528 508 aa15.73■□□□□ 0.11
ZIC3-201ENST00000287538 COPS6Q7L5N1 327 aa15.73■□□□□ 0.11
ZIC3-201ENST00000287538 PA2G4Q9UQ80 394 aaKnown RBP15.73■□□□□ 0.11
ZIC3-201ENST00000287538 SPATA31A3Q5VYP0 1347 aa15.73■□□□□ 0.11
ZIC3-201ENST00000287538 GSPT1P15170 499 aaKnown RBP15.73■□□□□ 0.11
ZIC3-201ENST00000287538 PHKG2P15735 406 aa15.73■□□□□ 0.11
ZIC3-201ENST00000287538 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
ZIC3-201ENST00000287538 XAGE3Q8WTP9 111 aa15.72■□□□□ 0.11
ZIC3-201ENST00000287538 LRRCC1Q9C099 1032 aa15.72■□□□□ 0.11
ZIC3-201ENST00000287538 PXDNQ92626 1479 aa15.72■□□□□ 0.11
ZIC3-201ENST00000287538 MYD88Q99836 296 aa15.72■□□□□ 0.11
ZIC3-201ENST00000287538 MST1RQ04912 1400 aa15.72■□□□□ 0.11
ZIC3-201ENST00000287538 BTG4Q9NY30 223 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 KIF24Q5T7B8 1368 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 CDC45O75419 566 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 SDSP20132 328 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 BMP2KLQ5H9B9 411 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 FAM13BQ9NYF5 915 aa15.71■□□□□ 0.11
ZIC3-201ENST00000287538 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
ZIC3-201ENST00000287538 ZCRB1Q8TBF4 217 aaKnown RBP15.7■□□□□ 0.1
ZIC3-201ENST00000287538 SLC52A2Q9HAB3 445 aa15.7■□□□□ 0.1
ZIC3-201ENST00000287538 CCDC85AQ96PX6 553 aaPredicted RBP15.7■□□□□ 0.1
ZIC3-201ENST00000287538 PRDM4Q9UKN5 801 aa15.7■□□□□ 0.1
ZIC3-201ENST00000287538 CASC1Q6TDU7 716 aa15.69■□□□□ 0.1
ZIC3-201ENST00000287538 MSNP26038 577 aaKnown RBP15.69■□□□□ 0.1
ZIC3-201ENST00000287538 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
ZIC3-201ENST00000287538 ARID3AQ99856 593 aa15.69■□□□□ 0.1
ZIC3-201ENST00000287538 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
ZIC3-201ENST00000287538 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
ZIC3-201ENST00000287538 TTC22Q5TAA0 569 aa15.69■□□□□ 0.1
ZIC3-201ENST00000287538 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
ZIC3-201ENST00000287538 ZBTB3Q9H5J0 574 aa15.68■□□□□ 0.1
ZIC3-201ENST00000287538 RGS12O14924 1447 aa15.68■□□□□ 0.1
ZIC3-201ENST00000287538 ZSCAN30Q86W11 494 aa15.68■□□□□ 0.1
ZIC3-201ENST00000287538 ANP32BQ92688 251 aaKnown RBP15.67■□□□□ 0.1
ZIC3-201ENST00000287538 LTN1O94822 1766 aa15.67■□□□□ 0.1
ZIC3-201ENST00000287538 OFD1O75665 1012 aa15.67■□□□□ 0.1
ZIC3-201ENST00000287538 A1BGP04217 495 aa15.67■□□□□ 0.1
ZIC3-201ENST00000287538 CCDC173Q0VFZ6 552 aa15.67■□□□□ 0.1
ZIC3-201ENST00000287538 GBP4Q96PP9 640 aa15.67■□□□□ 0.1
ZIC3-201ENST00000287538 RGPD2P0DJD1 1756 aa15.67■□□□□ 0.1
ZIC3-201ENST00000287538 PDE1AP54750 535 aa15.66■□□□□ 0.1
ZIC3-201ENST00000287538 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.66■□□□□ 0.1
ZIC3-201ENST00000287538 ANO2Q9NQ90 1003 aa15.66■□□□□ 0.1
ZIC3-201ENST00000287538 R3HCC1Q9Y3T6 440 aaKnown RBP15.66■□□□□ 0.1
ZIC3-201ENST00000287538 NASPP49321 788 aaPredicted RBP15.66■□□□□ 0.1
ZIC3-201ENST00000287538 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
ZIC3-201ENST00000287538 BEND3Q5T5X7 828 aa15.66■□□□□ 0.1
ZIC3-201ENST00000287538 KSR2Q6VAB6 950 aa15.66■□□□□ 0.1
ZIC3-201ENST00000287538 MX1P20591 662 aa15.66■□□□□ 0.1
ZIC3-201ENST00000287538 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
ZIC3-201ENST00000287538 FMNL2Q96PY5 1086 aa15.65■□□□□ 0.1
ZIC3-201ENST00000287538 FAM177BA6PVY3 158 aa15.65■□□□□ 0.1
ZIC3-201ENST00000287538 CEMIPQ8WUJ3 1361 aa15.65■□□□□ 0.1
ZIC3-201ENST00000287538 IL2RBP14784 551 aa15.64■□□□□ 0.1
ZIC3-201ENST00000287538 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.1
ZIC3-201ENST00000287538 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.1
ZIC3-201ENST00000287538 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.1
ZIC3-201ENST00000287538 CCDC8Q9H0W5 538 aaPredicted RBP15.64■□□□□ 0.1
ZIC3-201ENST00000287538 HYPKQ9NX55 129 aa15.64■□□□□ 0.1
ZIC3-201ENST00000287538 NFAT5O94916 1531 aa15.64■□□□□ 0.1
ZIC3-201ENST00000287538 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
ZIC3-201ENST00000287538 SKOR2Q2VWA4 1001 aaPredicted RBP15.64■□□□□ 0.09
ZIC3-201ENST00000287538 NWD1Q149M9 1564 aa15.64■□□□□ 0.09
ZIC3-201ENST00000287538 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
ZIC3-201ENST00000287538 DDX21Q9NR30 783 aaKnown RBP eCLIP15.64■□□□□ 0.09
ZIC3-201ENST00000287538 SOS1Q07889 1333 aaPredicted RBP15.64■□□□□ 0.09
ZIC3-201ENST00000287538 TNS3Q68CZ2 1445 aa15.64■□□□□ 0.09
ZIC3-201ENST00000287538 CHMP4AQ9BY43 222 aa15.63■□□□□ 0.09
ZIC3-201ENST00000287538 RHPN1Q8TCX5 695 aa15.63■□□□□ 0.09
ZIC3-201ENST00000287538 ATP10DQ9P241 1426 aa15.63■□□□□ 0.09
ZIC3-201ENST00000287538 UNC5CLQ8IV45 518 aa15.62■□□□□ 0.09
ZIC3-201ENST00000287538 G3BP1Q13283 466 aaKnown RBP eCLIP15.62■□□□□ 0.09
ZIC3-201ENST00000287538 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
ZIC3-201ENST00000287538 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
ZIC3-201ENST00000287538 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms