RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 ZNF213O14771 459 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 LETM1O95202 739 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 CASTP20810 708 aaKnown RBP17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 NLRP5P59047 1200 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 FAM177A1Q8N128 213 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 RAB34Q9BZG1 259 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 STK32BQ9NY57 414 aa17.24■□□□□ 0.35
TRAPPC8-201ENST00000283351 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 ERCC4Q92889 916 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 UBE3BQ7Z3V4 1068 aa17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 COMMD10Q9Y6G5 202 aa17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 AXDND1Q5T1B0 1012 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC8-201ENST00000283351 CATIPQ7Z7H3 387 aa17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 BAG4O95429 457 aaKnown RBP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 CENPHQ9H3R5 247 aa17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 MAP3K2Q9Y2U5 619 aa17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 CETN2P41208 172 aa17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC8-201ENST00000283351 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 MBD3O95983 291 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 PDE4BQ07343 736 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 MACROD2A1Z1Q3 448 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 STX8Q9UNK0 236 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 TSPY26PQ9H489 355 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 KAT14Q9H8E8 782 aa17.21■□□□□ 0.35
TRAPPC8-201ENST00000283351 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
TRAPPC8-201ENST00000283351 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
TRAPPC8-201ENST00000283351 TSG101Q99816 390 aa17.2■□□□□ 0.34
TRAPPC8-201ENST00000283351 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
TRAPPC8-201ENST00000283351 BICD1Q96G01 975 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 CFAP45Q9UL16 551 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 GOLIM4O00461 696 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 KIF21BO75037 1637 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 GSTO1P78417 241 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 GOLGA8AA7E2F4 631 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 GOLGA8BA8MQT2 603 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 CCDC112Q8NEF3 446 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 ACEP12821 1306 aa17.19■□□□□ 0.34
TRAPPC8-201ENST00000283351 ANXA1P04083 346 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 EZRP15311 586 aaKnown RBP17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 PUF60Q9UHX1 559 aaKnown RBP17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 TNRQ92752 1358 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 TOPBP1Q92547 1522 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 MX1P20591 662 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 GBP2P32456 591 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 USP8P40818 1118 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 TAF4BQ92750 862 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 CCP110O43303 1012 aa17.18■□□□□ 0.34
TRAPPC8-201ENST00000283351 CCDC192P0DO97 292 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 JAKMIP3Q5VZ66 844 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 RAB11FIP3O75154 756 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 RFX1P22670 979 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 CRNKL1Q9BZJ0 848 aaKnown RBP17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 CCDC191Q8NCU4 936 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 SYCP3Q8IZU3 236 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 MPNDQ8N594 471 aa17.17■□□□□ 0.34
TRAPPC8-201ENST00000283351 KIAA1328Q86T90 577 aa17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 ZNF354CQ86Y25 554 aa17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 GPR162Q16538 588 aa17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 IDEP14735 1019 aa17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 SSRP1Q08945 709 aaKnown RBP17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC8-201ENST00000283351 H0YHG0 523 aa17.15■□□□□ 0.34
TRAPPC8-201ENST00000283351 TCERG1LQ5VWI1 586 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms