RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TAF4BQ92750 862 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 MAP3K11Q16584 847 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 TXLNBQ8N3L3 684 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
SHPRH-201ENST00000275233 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
SHPRH-201ENST00000275233 CUL5Q93034 780 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 C8orf76Q96K31 380 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 FBLN1P23142 703 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 HAND2P61296 217 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
SHPRH-201ENST00000275233 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 EFCAB5A4FU69 1503 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 GOLIM4O00461 696 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
SHPRH-201ENST00000275233 GRM1Q13255 1194 aa13.84□□□□□ -0.19
SHPRH-201ENST00000275233 NAIPQ13075 1403 aa13.83□□□□□ -0.19
SHPRH-201ENST00000275233 JAKMIP3Q5VZ66 844 aa13.83□□□□□ -0.19
SHPRH-201ENST00000275233 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 CD109Q6YHK3 1445 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 PPP1R12BO60237 982 aaPredicted RBP13.83□□□□□ -0.2
SHPRH-201ENST00000275233 ANXA1P04083 346 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 ARHGAP29Q52LW3 1261 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC102AQ96A19 550 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 FEZ1Q99689 392 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 UQCRHP07919 91 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 CPLX3Q8WVH0 158 aa13.83□□□□□ -0.2
SHPRH-201ENST00000275233 TSG101Q99816 390 aa13.82□□□□□ -0.2
SHPRH-201ENST00000275233 CALRP27797 417 aaKnown RBP13.82□□□□□ -0.2
SHPRH-201ENST00000275233 SPTY2D1Q68D10 685 aaPredicted RBP13.82□□□□□ -0.2
SHPRH-201ENST00000275233 CACNA2D4Q7Z3S7 1137 aa13.82□□□□□ -0.2
SHPRH-201ENST00000275233 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
SHPRH-201ENST00000275233 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC113Q9H0I3 377 aa13.82□□□□□ -0.2
SHPRH-201ENST00000275233 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
SHPRH-201ENST00000275233 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
SHPRH-201ENST00000275233 RFC4P35249 363 aa13.81□□□□□ -0.2
SHPRH-201ENST00000275233 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 CTNNBL1Q8WYA6 563 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
SHPRH-201ENST00000275233 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 HYPKQ9NX55 129 aa13.81□□□□□ -0.2
SHPRH-201ENST00000275233 KIAA0754O94854 1291 aa13.81□□□□□ -0.2
SHPRH-201ENST00000275233 MACROD2A1Z1Q3 448 aa13.81□□□□□ -0.2
SHPRH-201ENST00000275233 F8W031 263 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-201ENST00000275233 MCM4P33991 863 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC178Q5BJE1 867 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 GOPCQ9HD26 462 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 ANAPC15P60006 121 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 SPA17Q15506 151 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 LDHAL6AQ6ZMR3 332 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 TMEM87AQ8NBN3 555 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 CATIPQ7Z7H3 387 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 ERLIN1O75477 346 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC194A0A1B0GVG4 234 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
SHPRH-201ENST00000275233 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
SHPRH-201ENST00000275233 BIN1O00499 593 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 HMGN5P82970 282 aaKnown RBP13.79□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC148Q8NFR7 591 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 IQSEC3Q9UPP2 1182 aaPredicted RBP13.79□□□□□ -0.2
SHPRH-201ENST00000275233 WDHD1O75717 1129 aaPredicted RBP13.79□□□□□ -0.2
SHPRH-201ENST00000275233 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 GDPD2Q9HCC8 539 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 TMEM266Q2M3C6 531 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC196A0A1B0GTZ2 297 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 IQCEQ6IPM2 695 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 DBF4Q9UBU7 674 aaPredicted RBP13.79□□□□□ -0.2
SHPRH-201ENST00000275233 PSMD1Q99460 953 aa13.79□□□□□ -0.2
SHPRH-201ENST00000275233 TFIP11Q9UBB9 837 aaKnown RBP13.79□□□□□ -0.2
SHPRH-201ENST00000275233 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 TMEM67Q5HYA8 995 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 ANKRD24Q8TF21 1146 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
SHPRH-201ENST00000275233 FLIIQ13045 1269 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 CNNM3Q8NE01 707 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 USP8P40818 1118 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 ERICH4A6NGS2 130 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 CAMSAP2Q08AD1 1489 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 CA8P35219 290 aa13.78□□□□□ -0.2
SHPRH-201ENST00000275233 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
SHPRH-201ENST00000275233 EIF3JO75822 258 aaKnown RBP13.77□□□□□ -0.2
SHPRH-201ENST00000275233 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.2
SHPRH-201ENST00000275233 MICU3Q86XE3 530 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms