RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
SDE2-201ENST00000272091 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
SDE2-201ENST00000272091 BEND3Q5T5X7 828 aa15.24■□□□□ 0.03
SDE2-201ENST00000272091 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
SDE2-201ENST00000272091 DDX21Q9NR30 783 aaKnown RBP eCLIP15.24■□□□□ 0.03
SDE2-201ENST00000272091 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
SDE2-201ENST00000272091 ARFGEF2Q9Y6D5 1785 aa15.23■□□□□ 0.03
SDE2-201ENST00000272091 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
SDE2-201ENST00000272091 FMNL2Q96PY5 1086 aa15.23■□□□□ 0.03
SDE2-201ENST00000272091 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
SDE2-201ENST00000272091 SNRPA1P09661 255 aaKnown RBP15.22■□□□□ 0.03
SDE2-201ENST00000272091 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
SDE2-201ENST00000272091 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
SDE2-201ENST00000272091 GCC1Q96CN9 775 aa15.22■□□□□ 0.03
SDE2-201ENST00000272091 RPAP2Q8IXW5 612 aaPredicted RBP15.22■□□□□ 0.03
SDE2-201ENST00000272091 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
SDE2-201ENST00000272091 DCTPP1Q9H773 170 aa15.21■□□□□ 0.03
SDE2-201ENST00000272091 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
SDE2-201ENST00000272091 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
SDE2-201ENST00000272091 SPATA31A5Q5VU36 1347 aa15.2■□□□□ 0.02
SDE2-201ENST00000272091 SPATA31A7Q8IWB4 1347 aa15.2■□□□□ 0.02
SDE2-201ENST00000272091 PIP4K2AP48426 406 aaPredicted RBP15.2■□□□□ 0.02
SDE2-201ENST00000272091 MAP3K2Q9Y2U5 619 aa15.2■□□□□ 0.02
SDE2-201ENST00000272091 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
SDE2-201ENST00000272091 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
SDE2-201ENST00000272091 JCADQ9P266 1359 aa15.2■□□□□ 0.02
SDE2-201ENST00000272091 KSR2Q6VAB6 950 aa15.19■□□□□ 0.02
SDE2-201ENST00000272091 SRCIN1Q9C0H9 1055 aa15.19■□□□□ 0.02
SDE2-201ENST00000272091 GNAI2P04899 355 aa15.19■□□□□ 0.02
SDE2-201ENST00000272091 PIGBQ92521 554 aa15.19■□□□□ 0.02
SDE2-201ENST00000272091 MYL6BP14649 208 aa15.18■□□□□ 0.02
SDE2-201ENST00000272091 CERKQ8TCT0 537 aa15.18■□□□□ 0.02
SDE2-201ENST00000272091 LRRFIP2Q9Y608 721 aaKnown RBP15.18■□□□□ 0.02
SDE2-201ENST00000272091 BCL9O00512 1426 aa15.18■□□□□ 0.02
SDE2-201ENST00000272091 GNAI3P08754 354 aa15.18■□□□□ 0.02
SDE2-201ENST00000272091 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
SDE2-201ENST00000272091 AFDNP55196 1824 aaKnown RBP15.18■□□□□ 0.02
SDE2-201ENST00000272091 MSH5O43196 834 aa15.18■□□□□ 0.02
SDE2-201ENST00000272091 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
SDE2-201ENST00000272091 PNMA6EA0A0J9YXQ4 647 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 NBPF14Q5TI25 921 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 NBPF10Q6P3W6 841 aaKnown RBP15.17■□□□□ 0.02
SDE2-201ENST00000272091 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 THRAP3Q9Y2W1 955 aaKnown RBP15.17■□□□□ 0.02
SDE2-201ENST00000272091 TJP1Q07157 1748 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 XAGE3Q8WTP9 111 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 AIMP1Q12904 312 aaKnown RBP15.17■□□□□ 0.02
SDE2-201ENST00000272091 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 ASAP1Q9ULH1 1129 aa15.17■□□□□ 0.02
SDE2-201ENST00000272091 EXOC5O00471 708 aa15.16■□□□□ 0.02
SDE2-201ENST00000272091 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
SDE2-201ENST00000272091 COPS6Q7L5N1 327 aa15.16■□□□□ 0.02
SDE2-201ENST00000272091 ATG3Q9NT62 314 aa15.16■□□□□ 0.02
SDE2-201ENST00000272091 ATP8B2P98198 1209 aa15.16■□□□□ 0.02
SDE2-201ENST00000272091 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
SDE2-201ENST00000272091 IGKV5-2P06315 115 aa15.15■□□□□ 0.02
SDE2-201ENST00000272091 SEC24BO95487 1268 aa15.15■□□□□ 0.02
SDE2-201ENST00000272091 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
SDE2-201ENST00000272091 BARGINQ6ZT62 677 aa15.14■□□□□ 0.01
SDE2-201ENST00000272091 ALDH1L1O75891 902 aa15.14■□□□□ 0.01
SDE2-201ENST00000272091 UNC5CLQ8IV45 518 aa15.14■□□□□ 0.01
SDE2-201ENST00000272091 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
SDE2-201ENST00000272091 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
SDE2-201ENST00000272091 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
SDE2-201ENST00000272091 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
SDE2-201ENST00000272091 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
SDE2-201ENST00000272091 UTYO14607 1347 aa15.13■□□□□ 0.01
SDE2-201ENST00000272091 ERBB4Q15303 1308 aa15.13■□□□□ 0.01
SDE2-201ENST00000272091 A1BGP04217 495 aa15.13■□□□□ 0.01
SDE2-201ENST00000272091 SLC4A9Q96Q91 983 aa15.13■□□□□ 0.01
SDE2-201ENST00000272091 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
SDE2-201ENST00000272091 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
SDE2-201ENST00000272091 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
SDE2-201ENST00000272091 C8orf37Q96NL8 207 aa15.13■□□□□ 0.01
SDE2-201ENST00000272091 DDX58O95786 925 aaKnown RBP15.12■□□□□ 0.01
SDE2-201ENST00000272091 POLA2Q14181 598 aa15.12■□□□□ 0.01
SDE2-201ENST00000272091 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
SDE2-201ENST00000272091 OTUD7AQ8TE49 926 aaPredicted RBP15.12■□□□□ 0.01
SDE2-201ENST00000272091 DDB1Q16531 1140 aa15.12■□□□□ 0.01
SDE2-201ENST00000272091 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
SDE2-201ENST00000272091 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
SDE2-201ENST00000272091 HMMRO75330 724 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
SDE2-201ENST00000272091 KAZALD1Q96I82 304 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 PLEKHM2Q8IWE5 1019 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 CICQ96RK0 1608 aaPredicted RBP15.11■□□□□ 0.01
SDE2-201ENST00000272091 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 EXOC6BQ9Y2D4 811 aa15.11■□□□□ 0.01
SDE2-201ENST00000272091 VPS72Q15906 364 aa15.1■□□□□ 0.01
SDE2-201ENST00000272091 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
SDE2-201ENST00000272091 HSPA1LP34931 641 aa15.1■□□□□ 0.01
SDE2-201ENST00000272091 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
SDE2-201ENST00000272091 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
SDE2-201ENST00000272091 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
SDE2-201ENST00000272091 NPM2Q86SE8 214 aaKnown RBP15.09■□□□□ 0.01
SDE2-201ENST00000272091 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms