RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 EXOC5O00471 708 aa15.82■□□□□ 0.12
CAPN9-201ENST00000271971 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
CAPN9-201ENST00000271971 INTS3Q68E01 1043 aaKnown RBP15.82■□□□□ 0.12
CAPN9-201ENST00000271971 THRAP3Q9Y2W1 955 aaKnown RBP15.81■□□□□ 0.12
CAPN9-201ENST00000271971 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
CAPN9-201ENST00000271971 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
CAPN9-201ENST00000271971 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
CAPN9-201ENST00000271971 DDB1Q16531 1140 aa15.8■□□□□ 0.12
CAPN9-201ENST00000271971 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
CAPN9-201ENST00000271971 FAM98CQ17RN3 349 aaKnown RBP15.79■□□□□ 0.12
CAPN9-201ENST00000271971 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
CAPN9-201ENST00000271971 PTCD1O75127 700 aaKnown RBP15.79■□□□□ 0.12
CAPN9-201ENST00000271971 PIP4K2AP48426 406 aaPredicted RBP15.79■□□□□ 0.12
CAPN9-201ENST00000271971 MEX3CQ5U5Q3 659 aaKnown RBP15.79■□□□□ 0.12
CAPN9-201ENST00000271971 FNBP4Q8N3X1 1017 aaPredicted RBP15.79■□□□□ 0.12
CAPN9-201ENST00000271971 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
CAPN9-201ENST00000271971 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
CAPN9-201ENST00000271971 CDCA7Q9BWT1 371 aaPredicted RBP15.78■□□□□ 0.12
CAPN9-201ENST00000271971 USP21Q9UK80 565 aa15.78■□□□□ 0.12
CAPN9-201ENST00000271971 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
CAPN9-201ENST00000271971 VPS72Q15906 364 aa15.78■□□□□ 0.12
CAPN9-201ENST00000271971 PIGBQ92521 554 aa15.78■□□□□ 0.12
CAPN9-201ENST00000271971 MEIS3Q99687 375 aa15.78■□□□□ 0.12
CAPN9-201ENST00000271971 PDIA6Q15084 440 aa15.77■□□□□ 0.12
CAPN9-201ENST00000271971 BARGINQ6ZT62 677 aa15.77■□□□□ 0.12
CAPN9-201ENST00000271971 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
CAPN9-201ENST00000271971 MYL6BP14649 208 aa15.77■□□□□ 0.11
CAPN9-201ENST00000271971 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.11
CAPN9-201ENST00000271971 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
CAPN9-201ENST00000271971 MARCH10Q8NA82 808 aaPredicted RBP15.76■□□□□ 0.11
CAPN9-201ENST00000271971 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
CAPN9-201ENST00000271971 ADCY9O60503 1353 aa15.76■□□□□ 0.11
CAPN9-201ENST00000271971 PI4KAP2A4QPH2 592 aa15.76■□□□□ 0.11
CAPN9-201ENST00000271971 CCT4P50991 539 aaKnown RBP15.76■□□□□ 0.11
CAPN9-201ENST00000271971 PI4KAP1Q8N8J0 262 aa15.76■□□□□ 0.11
CAPN9-201ENST00000271971 RWDD1Q9H446 243 aaPredicted RBP15.76■□□□□ 0.11
CAPN9-201ENST00000271971 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
CAPN9-201ENST00000271971 BCL9O00512 1426 aa15.75■□□□□ 0.11
CAPN9-201ENST00000271971 A0A0G2JS52 829 aa15.75■□□□□ 0.11
CAPN9-201ENST00000271971 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
CAPN9-201ENST00000271971 CHMP4BQ9H444 224 aaKnown RBP15.75■□□□□ 0.11
CAPN9-201ENST00000271971 AFF2P51816 1311 aa15.75■□□□□ 0.11
CAPN9-201ENST00000271971 ATP10DQ9P241 1426 aa15.74■□□□□ 0.11
CAPN9-201ENST00000271971 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
CAPN9-201ENST00000271971 ACSBG1Q96GR2 724 aa15.74■□□□□ 0.11
CAPN9-201ENST00000271971 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
CAPN9-201ENST00000271971 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
CAPN9-201ENST00000271971 ATG3Q9NT62 314 aa15.73■□□□□ 0.11
CAPN9-201ENST00000271971 RGS3P49796 1198 aa15.73■□□□□ 0.11
CAPN9-201ENST00000271971 SIRT2Q8IXJ6 389 aa15.73■□□□□ 0.11
CAPN9-201ENST00000271971 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
CAPN9-201ENST00000271971 THSD7AQ9UPZ6 1657 aa15.72■□□□□ 0.11
CAPN9-201ENST00000271971 RTL5Q5HYW3 569 aaPredicted RBP15.72■□□□□ 0.11
CAPN9-201ENST00000271971 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
CAPN9-201ENST00000271971 MAP3K2Q9Y2U5 619 aa15.72■□□□□ 0.11
CAPN9-201ENST00000271971 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
CAPN9-201ENST00000271971 XAGE3Q8WTP9 111 aa15.71■□□□□ 0.11
CAPN9-201ENST00000271971 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.11
CAPN9-201ENST00000271971 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
CAPN9-201ENST00000271971 NBPF26B4DH59 902 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 NBPF14Q5TI25 921 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 NBPF10Q6P3W6 841 aaKnown RBP15.7■□□□□ 0.1
CAPN9-201ENST00000271971 NBPF15Q8N660 670 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 A1BGP04217 495 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 BEND3Q5T5X7 828 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 KSR2Q6VAB6 950 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 COPS6Q7L5N1 327 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 IL27Q8NEV9 243 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
CAPN9-201ENST00000271971 EP400Q96L91 3159 aa15.69■□□□□ 0.1
CAPN9-201ENST00000271971 TJP1Q07157 1748 aa15.69■□□□□ 0.1
CAPN9-201ENST00000271971 CEP85Q6P2H3 762 aa15.69■□□□□ 0.1
CAPN9-201ENST00000271971 DNAJC10Q8IXB1 793 aa15.69■□□□□ 0.1
CAPN9-201ENST00000271971 USP44Q9H0E7 712 aa15.69■□□□□ 0.1
CAPN9-201ENST00000271971 AFDNP55196 1824 aaKnown RBP15.68■□□□□ 0.1
CAPN9-201ENST00000271971 SLC4A9Q96Q91 983 aa15.68■□□□□ 0.1
CAPN9-201ENST00000271971 DDX58O95786 925 aaKnown RBP15.68■□□□□ 0.1
CAPN9-201ENST00000271971 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
CAPN9-201ENST00000271971 SMC5Q8IY18 1101 aa15.68■□□□□ 0.1
CAPN9-201ENST00000271971 GJD4Q96KN9 370 aaPredicted RBP15.68■□□□□ 0.1
CAPN9-201ENST00000271971 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 ATRNO75882 1429 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 KCNQ2O43526 872 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 GNAI2P04899 355 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 ANKRD44Q8N8A2 993 aa15.67■□□□□ 0.1
CAPN9-201ENST00000271971 LRRFIP2Q9Y608 721 aaKnown RBP15.66■□□□□ 0.1
CAPN9-201ENST00000271971 GNAI3P08754 354 aa15.65■□□□□ 0.1
CAPN9-201ENST00000271971 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
CAPN9-201ENST00000271971 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
CAPN9-201ENST00000271971 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
CAPN9-201ENST00000271971 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
CAPN9-201ENST00000271971 TTLL7Q6ZT98 887 aa15.64■□□□□ 0.09
CAPN9-201ENST00000271971 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
CAPN9-201ENST00000271971 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
CAPN9-201ENST00000271971 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
CAPN9-201ENST00000271971 PTF1AQ7RTS3 328 aa15.64■□□□□ 0.09
CAPN9-201ENST00000271971 RPAP2Q8IXW5 612 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms