RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
TCTN3-201ENST00000265993 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
TCTN3-201ENST00000265993 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
TCTN3-201ENST00000265993 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
TCTN3-201ENST00000265993 RHPN1Q8TCX5 695 aa13.28□□□□□ -0.28
TCTN3-201ENST00000265993 GOLGA6L22H0YM25 854 aa13.27□□□□□ -0.28
TCTN3-201ENST00000265993 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.28
TCTN3-201ENST00000265993 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
TCTN3-201ENST00000265993 DDX17Q92841 729 aaKnown RBP13.27□□□□□ -0.29
TCTN3-201ENST00000265993 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
TCTN3-201ENST00000265993 ADCY9O60503 1353 aa13.27□□□□□ -0.29
TCTN3-201ENST00000265993 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
TCTN3-201ENST00000265993 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
TCTN3-201ENST00000265993 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 PA2G4Q9UQ80 394 aaKnown RBP13.26□□□□□ -0.29
TCTN3-201ENST00000265993 PRPF40AO75400 957 aaKnown RBP13.26□□□□□ -0.29
TCTN3-201ENST00000265993 NUCB2P80303 420 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 STAP2Q9UGK3 403 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 TCHHQ07283 1943 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
TCTN3-201ENST00000265993 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 BABAM1Q9NWV8 329 aa13.26□□□□□ -0.29
TCTN3-201ENST00000265993 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 POLA2Q14181 598 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 SKOR2Q2VWA4 1001 aaPredicted RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 SLC39A6Q13433 755 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 OS9Q13438 667 aaPredicted RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 KLHL40Q2TBA0 621 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
TCTN3-201ENST00000265993 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 PXDNLA1KZ92 1463 aa13.25□□□□□ -0.29
TCTN3-201ENST00000265993 NSFL1CQ9UNZ2 370 aaKnown RBP13.24□□□□□ -0.29
TCTN3-201ENST00000265993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
TCTN3-201ENST00000265993 MED1Q15648 1581 aaPredicted RBP13.24□□□□□ -0.29
TCTN3-201ENST00000265993 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
TCTN3-201ENST00000265993 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
TCTN3-201ENST00000265993 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
TCTN3-201ENST00000265993 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
TCTN3-201ENST00000265993 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
TCTN3-201ENST00000265993 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
TCTN3-201ENST00000265993 GPT2Q8TD30 523 aa13.23□□□□□ -0.29
TCTN3-201ENST00000265993 CPA1P15085 419 aa13.22□□□□□ -0.29
TCTN3-201ENST00000265993 KIF1BPQ96EK5 621 aa13.22□□□□□ -0.29
TCTN3-201ENST00000265993 CWC22Q9HCG8 908 aaKnown RBP13.22□□□□□ -0.29
TCTN3-201ENST00000265993 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
TCTN3-201ENST00000265993 MCCP23508 829 aa13.22□□□□□ -0.29
TCTN3-201ENST00000265993 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
TCTN3-201ENST00000265993 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
TCTN3-201ENST00000265993 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
TCTN3-201ENST00000265993 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
TCTN3-201ENST00000265993 KLHDC4Q8TBB5 520 aa13.21□□□□□ -0.29
TCTN3-201ENST00000265993 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
TCTN3-201ENST00000265993 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
TCTN3-201ENST00000265993 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
TCTN3-201ENST00000265993 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
TCTN3-201ENST00000265993 MYL6BP14649 208 aa13.2□□□□□ -0.3
TCTN3-201ENST00000265993 ZSCAN23Q3MJ62 389 aa13.2□□□□□ -0.3
TCTN3-201ENST00000265993 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
TCTN3-201ENST00000265993 HOXB7P09629 217 aa13.2□□□□□ -0.3
TCTN3-201ENST00000265993 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
TCTN3-201ENST00000265993 SIL1Q9H173 461 aa13.2□□□□□ -0.3
TCTN3-201ENST00000265993 AMOTQ4VCS5 1084 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 SGSM2O43147 1006 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 HSPA4P34932 840 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 NASPP49321 788 aaPredicted RBP13.19□□□□□ -0.3
TCTN3-201ENST00000265993 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 PTMSP20962 102 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 KSR2Q6VAB6 950 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
TCTN3-201ENST00000265993 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
TCTN3-201ENST00000265993 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
TCTN3-201ENST00000265993 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 ERBB3P21860 1342 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 RAD50Q92878 1312 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 ANAPC15P60006 121 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 CUL4AQ13619 759 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
TCTN3-201ENST00000265993 BICC1Q9H694 974 aaKnown RBP13.18□□□□□ -0.3
TCTN3-201ENST00000265993 ISY1Q9ULR0 285 aaKnown RBP13.18□□□□□ -0.3
TCTN3-201ENST00000265993 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
TCTN3-201ENST00000265993 AOX1Q06278 1338 aa13.17□□□□□ -0.3
TCTN3-201ENST00000265993 PTH1RQ03431 593 aa13.17□□□□□ -0.3
TCTN3-201ENST00000265993 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
TCTN3-201ENST00000265993 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
TCTN3-201ENST00000265993 CLASRPQ8N2M8 674 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms