RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 TSPY26PQ9H489 355 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 CCDC9Q9Y3X0 531 aaKnown RBP20.32■□□□□ 0.84
SQLE-201ENST00000265896 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
SQLE-201ENST00000265896 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
SQLE-201ENST00000265896 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
SQLE-201ENST00000265896 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
SQLE-201ENST00000265896 CASTP20810 708 aaKnown RBP20.31■□□□□ 0.84
SQLE-201ENST00000265896 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
SQLE-201ENST00000265896 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
SQLE-201ENST00000265896 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
SQLE-201ENST00000265896 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
SQLE-201ENST00000265896 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
SQLE-201ENST00000265896 ZKSCAN5Q9Y2L8 839 aa20.3■□□□□ 0.84
SQLE-201ENST00000265896 SNX14Q9Y5W7 946 aa20.3■□□□□ 0.84
SQLE-201ENST00000265896 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 VPS37CA5D8V6 355 aaPredicted RBP20.29■□□□□ 0.84
SQLE-201ENST00000265896 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
SQLE-201ENST00000265896 SIL1Q9H173 461 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 OVOS2A0A0J9YW53 1432 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 OVOS2Q6IE36 1432 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 PEAK1Q9H792 1746 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 HOXC9P31274 260 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 PTH1RQ03431 593 aa20.29■□□□□ 0.84
SQLE-201ENST00000265896 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
SQLE-201ENST00000265896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.29■□□□□ 0.845e-9■■■□□ 18.3
SQLE-201ENST00000265896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.29■□□□□ 0.84
SQLE-201ENST00000265896 CUL4AQ13619 759 aa20.28■□□□□ 0.84
SQLE-201ENST00000265896 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.28■□□□□ 0.84
SQLE-201ENST00000265896 PPFIA3O75145 1194 aa20.28■□□□□ 0.84
SQLE-201ENST00000265896 CWF19L2Q2TBE0 894 aaKnown RBP20.28■□□□□ 0.84
SQLE-201ENST00000265896 GLIPR1L2Q4G1C9 344 aa20.28■□□□□ 0.84
SQLE-201ENST00000265896 RUFY3Q7L099 469 aa20.28■□□□□ 0.84
SQLE-201ENST00000265896 KLHDC4Q8TBB5 520 aa20.28■□□□□ 0.84
SQLE-201ENST00000265896 FLT4P35916 1363 aa20.28■□□□□ 0.84
SQLE-201ENST00000265896 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
SQLE-201ENST00000265896 SYT1P21579 422 aa20.27■□□□□ 0.83
SQLE-201ENST00000265896 PI4K2BQ8TCG2 481 aa20.27■□□□□ 0.83
SQLE-201ENST00000265896 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.83
SQLE-201ENST00000265896 TNRQ92752 1358 aa20.26■□□□□ 0.83
SQLE-201ENST00000265896 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
SQLE-201ENST00000265896 MBD3O95983 291 aa20.26■□□□□ 0.83
SQLE-201ENST00000265896 TPM2P07951 284 aa20.26■□□□□ 0.83
SQLE-201ENST00000265896 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
SQLE-201ENST00000265896 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
SQLE-201ENST00000265896 SPC24Q8NBT2 197 aa20.26■□□□□ 0.83
SQLE-201ENST00000265896 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
SQLE-201ENST00000265896 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
SQLE-201ENST00000265896 HSPA4P34932 840 aa20.25■□□□□ 0.83
SQLE-201ENST00000265896 IGSF1Q8N6C5 1336 aa20.25■□□□□ 0.83
SQLE-201ENST00000265896 KCNJ4P48050 445 aa20.25■□□□□ 0.83
SQLE-201ENST00000265896 CAMK4Q16566 473 aa20.25■□□□□ 0.83
SQLE-201ENST00000265896 CCDC8Q9H0W5 538 aaPredicted RBP20.25■□□□□ 0.83
SQLE-201ENST00000265896 SMC3Q9UQE7 1217 aa20.25■□□□□ 0.83
SQLE-201ENST00000265896 CHGBP05060 677 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 STK3Q13188 491 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 DIAPH3Q9NSV4 1193 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 SGSM2O43147 1006 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 TAF6LQ9Y6J9 622 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
SQLE-201ENST00000265896 FOSBP53539 338 aa20.23■□□□□ 0.83
SQLE-201ENST00000265896 EDC3Q96F86 508 aaKnown RBP20.23■□□□□ 0.83
SQLE-201ENST00000265896 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
SQLE-201ENST00000265896 WDR33Q9C0J8 1336 aaKnown RBP20.23■□□□□ 0.83
SQLE-201ENST00000265896 TCHHQ07283 1943 aa20.23■□□□□ 0.83
SQLE-201ENST00000265896 STX6O43752 255 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 MCM2P49736 904 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 SSH3Q8TE77 659 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 C9orf78Q9NZ63 289 aaPredicted RBP20.22■□□□□ 0.83
SQLE-201ENST00000265896 SBNO1A3KN83 1393 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
SQLE-201ENST00000265896 ADCY5O95622 1261 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 KCNA6P17658 529 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 GJB2P29033 226 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 LSG1Q9H089 658 aaKnown RBP20.22■□□□□ 0.83
SQLE-201ENST00000265896 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 STAP2Q9UGK3 403 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 ADAMTS13Q76LX8 1427 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 C3P01024 1663 aa20.22■□□□□ 0.83
SQLE-201ENST00000265896 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
SQLE-201ENST00000265896 DNAAF4Q8WXU2 420 aa20.21■□□□□ 0.83
SQLE-201ENST00000265896 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
SQLE-201ENST00000265896 SETD1AO15047 1707 aaKnown RBP20.21■□□□□ 0.83
SQLE-201ENST00000265896 CNTROBQ8N137 903 aa20.2■□□□□ 0.82
SQLE-201ENST00000265896 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
SQLE-201ENST00000265896 ZSCAN22P10073 491 aaPredicted RBP20.2■□□□□ 0.82
SQLE-201ENST00000265896 TLR7Q9NYK1 1049 aaKnown RBP20.2■□□□□ 0.82
SQLE-201ENST00000265896 TAOK2Q9UL54 1235 aa20.2■□□□□ 0.82
SQLE-201ENST00000265896 RAD50Q92878 1312 aa20.2■□□□□ 0.82
SQLE-201ENST00000265896 AACSQ86V21 672 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 TEFQ10587 303 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
SQLE-201ENST00000265896 BOLA2Q9H3K6 86 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
SQLE-201ENST00000265896 MAP3K2Q9Y2U5 619 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms