RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CRB1P82279 1406 aa11.48□□□□□ -0.57
SSR3-201ENST00000265044 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
SSR3-201ENST00000265044 HSP90AB4PQ58FF6 505 aa11.48□□□□□ -0.57
SSR3-201ENST00000265044 IFIT2P09913 472 aaKnown RBP11.48□□□□□ -0.57
SSR3-201ENST00000265044 CEP85Q6P2H3 762 aa11.48□□□□□ -0.57
SSR3-201ENST00000265044 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
SSR3-201ENST00000265044 PPP1R42Q7Z4L9 355 aa11.48□□□□□ -0.57
SSR3-201ENST00000265044 GPATCH3Q96I76 525 aa11.48□□□□□ -0.57
SSR3-201ENST00000265044 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
SSR3-201ENST00000265044 CLASRPQ8N2M8 674 aaKnown RBP11.47□□□□□ -0.57
SSR3-201ENST00000265044 NUCB1Q02818 461 aa11.47□□□□□ -0.57
SSR3-201ENST00000265044 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
SSR3-201ENST00000265044 PIK3C2AO00443 1686 aa11.47□□□□□ -0.57
SSR3-201ENST00000265044 A0A087WZG4 1122 aa11.46□□□□□ -0.57
SSR3-201ENST00000265044 A1BGP04217 495 aa11.46□□□□□ -0.57
SSR3-201ENST00000265044 KCNJ4P48050 445 aa11.46□□□□□ -0.57
SSR3-201ENST00000265044 GORABQ5T7V8 394 aa11.46□□□□□ -0.57
SSR3-201ENST00000265044 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
SSR3-201ENST00000265044 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.58
SSR3-201ENST00000265044 UBE3BQ7Z3V4 1068 aa11.46□□□□□ -0.58
SSR3-201ENST00000265044 FAM98CQ17RN3 349 aaKnown RBP11.45□□□□□ -0.58
SSR3-201ENST00000265044 C16orf71Q8IYS4 520 aaPredicted RBP11.45□□□□□ -0.58
SSR3-201ENST00000265044 SLKQ9H2G2 1235 aaPredicted RBP11.45□□□□□ -0.58
SSR3-201ENST00000265044 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
SSR3-201ENST00000265044 LINS1Q8NG48 757 aa11.45□□□□□ -0.58
SSR3-201ENST00000265044 ERVV-2B6SEH9 535 aa11.45□□□□□ -0.58
SSR3-201ENST00000265044 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
SSR3-201ENST00000265044 HSCBQ8IWL3 235 aa11.45□□□□□ -0.58
SSR3-201ENST00000265044 DCTPP1Q9H773 170 aa11.45□□□□□ -0.58
SSR3-201ENST00000265044 NUTM1Q86Y26 1132 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 C22orf23Q9BZE7 217 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 GRM8O00222 908 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 CDC45O75419 566 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 ATP8B2P98198 1209 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 TSHZ3Q63HK5 1081 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 TEX13AQ9BXU3 409 aaPredicted RBP11.44□□□□□ -0.58
SSR3-201ENST00000265044 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
SSR3-201ENST00000265044 GPTP24298 496 aa11.43□□□□□ -0.58
SSR3-201ENST00000265044 ASAP1Q9ULH1 1129 aa11.43□□□□□ -0.58
SSR3-201ENST00000265044 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
SSR3-201ENST00000265044 PNMA6EA0A0J9YXQ4 647 aa11.43□□□□□ -0.58
SSR3-201ENST00000265044 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
SSR3-201ENST00000265044 MAP4K4O95819 1239 aaPredicted RBP11.43□□□□□ -0.58
SSR3-201ENST00000265044 DNAJC10Q8IXB1 793 aa11.43□□□□□ -0.58
SSR3-201ENST00000265044 MCCP23508 829 aa11.42□□□□□ -0.58
SSR3-201ENST00000265044 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
SSR3-201ENST00000265044 KIF1BPQ96EK5 621 aa11.42□□□□□ -0.58
SSR3-201ENST00000265044 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 PEAK1Q9H792 1746 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 ANO2Q9NQ90 1003 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 CPDO75976 1380 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 CEMIPQ8WUJ3 1361 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
SSR3-201ENST00000265044 USP21Q9UK80 565 aa11.41□□□□□ -0.58
SSR3-201ENST00000265044 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
SSR3-201ENST00000265044 ERC2O15083 957 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 MX1P20591 662 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 AACSQ86V21 672 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 ERC1Q8IUD2 1116 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 DIAPH3Q9NSV4 1193 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 REC8O95072 547 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
SSR3-201ENST00000265044 OTUD7AQ8TE49 926 aaPredicted RBP11.4□□□□□ -0.58
SSR3-201ENST00000265044 CWC25Q9NXE8 425 aaPredicted RBP11.4□□□□□ -0.58
SSR3-201ENST00000265044 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 CCDC57Q2TAC2 916 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 PIGBQ92521 554 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 METTL22Q9BUU2 404 aaPredicted RBP11.39□□□□□ -0.59
SSR3-201ENST00000265044 KIF1AQ12756 1690 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 MSH5O43196 834 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 SEC24BO95487 1268 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 BICDL1Q6ZP65 573 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
SSR3-201ENST00000265044 TTLL7Q6ZT98 887 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 CCDC8Q9H0W5 538 aaPredicted RBP11.38□□□□□ -0.59
SSR3-201ENST00000265044 MEGF6O75095 1541 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
SSR3-201ENST00000265044 PXDNQ92626 1479 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 NFAT5O94916 1531 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 FAM182BQ5T319 152 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
SSR3-201ENST00000265044 PLBD2Q8NHP8 589 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 TRMT112Q9UI30 125 aaKnown RBP11.38□□□□□ -0.59
SSR3-201ENST00000265044 NWD1Q149M9 1564 aa11.38□□□□□ -0.59
SSR3-201ENST00000265044 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
SSR3-201ENST00000265044 PLEKHM2Q8IWE5 1019 aa11.37□□□□□ -0.59
SSR3-201ENST00000265044 ANP32EQ9BTT0 268 aa11.37□□□□□ -0.59
SSR3-201ENST00000265044 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
SSR3-201ENST00000265044 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
SSR3-201ENST00000265044 PDE1AP54750 535 aa11.36□□□□□ -0.59
SSR3-201ENST00000265044 GCKRQ14397 625 aa11.36□□□□□ -0.59
SSR3-201ENST00000265044 SUCLG2Q96I99 432 aa11.36□□□□□ -0.59
SSR3-201ENST00000265044 TTC22Q5TAA0 569 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms