RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DCTPP1Q9H773 170 aa19.75■□□□□ 0.75
PHRF1-201ENST00000264555 NCKAP5LQ9HCH0 1330 aa19.75■□□□□ 0.75
PHRF1-201ENST00000264555 IL13P35225 146 aa19.75■□□□□ 0.75
PHRF1-201ENST00000264555 TDO2P48775 406 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 EYA1Q99502 592 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 SBNO2Q9Y2G9 1366 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 AIDAQ96BJ3 306 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 MTMR7Q9Y216 660 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 TSHZ3Q63HK5 1081 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 SMC2O95347 1197 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 ANXA1P04083 346 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 CCDC70Q6NSX1 233 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 TEX13AQ9BXU3 409 aaPredicted RBP19.74■□□□□ 0.75
PHRF1-201ENST00000264555 KDM5CP41229 1560 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
PHRF1-201ENST00000264555 CTDP1Q9Y5B0 961 aaPredicted RBP19.73■□□□□ 0.75
PHRF1-201ENST00000264555 LRP2BPQ9P2M1 347 aa19.73■□□□□ 0.75
PHRF1-201ENST00000264555 SYCE3A1L190 88 aa19.73■□□□□ 0.75
PHRF1-201ENST00000264555 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
PHRF1-201ENST00000264555 ANKRD13DQ6ZTN6 518 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 DDX11Q96FC9 970 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 TRIM35Q9UPQ4 493 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 TXLNAP40222 546 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 CEP89Q96ST8 783 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 TCEAL9Q9UHQ7 104 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 SOS1Q07889 1333 aaPredicted RBP19.72■□□□□ 0.75
PHRF1-201ENST00000264555 CEP85Q6P2H3 762 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 UBAC1Q9BSL1 405 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 CWC25Q9NXE8 425 aaPredicted RBP19.72■□□□□ 0.75
PHRF1-201ENST00000264555 ZNF652Q9Y2D9 606 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 MAP3K5Q99683 1374 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 PLXNC1O60486 1568 aa19.72■□□□□ 0.75
PHRF1-201ENST00000264555 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 PDILTQ8N807 584 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 NUP133Q8WUM0 1156 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 GPS2Q13227 327 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 UBE3BQ7Z3V4 1068 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 SNX21Q969T3 373 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 SCAND2PQ9GZW5 306 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-201ENST00000264555 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 ZBTB3Q9H5J0 574 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 DHX8Q14562 1220 aaKnown RBP19.71■□□□□ 0.75
PHRF1-201ENST00000264555 KSR2Q6VAB6 950 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 FERMT3Q86UX7 667 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 SPC24Q8NBT2 197 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
PHRF1-201ENST00000264555 STK11IPQ8N1F8 1099 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 KDM5DQ9BY66 1539 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 ZBTB7BO15156 539 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-201ENST00000264555 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 WASF1Q92558 559 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 CHRNA2Q15822 529 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 ESPNB1AK53 854 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 HOXC9P31274 260 aa19.7■□□□□ 0.74
PHRF1-201ENST00000264555 KDM5AP29375 1690 aaKnown RBP19.7■□□□□ 0.74
PHRF1-201ENST00000264555 ATP5J2-PTCD1G3V325 749 aa19.69■□□□□ 0.74
PHRF1-201ENST00000264555 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
PHRF1-201ENST00000264555 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PHRF1-201ENST00000264555 KCNA6P17658 529 aa19.69■□□□□ 0.74
PHRF1-201ENST00000264555 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
PHRF1-201ENST00000264555 MAP3K11Q16584 847 aa19.69■□□□□ 0.74
PHRF1-201ENST00000264555 MNS1Q8NEH6 495 aa19.69■□□□□ 0.74
PHRF1-201ENST00000264555 PREX2Q70Z35 1606 aa19.69■□□□□ 0.74
PHRF1-201ENST00000264555 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-201ENST00000264555 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 ANKRD18BA2A2Z9 1011 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 ANAPC15P60006 121 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 ESYT1Q9BSJ8 1104 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 BAG4O95429 457 aaKnown RBP19.68■□□□□ 0.74
PHRF1-201ENST00000264555 FILIP1LQ4L180 1135 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 CCDC183Q5T5S1 534 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 MAGI2Q86UL8 1455 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 CFAP74Q9C0B2 1584 aa19.68■□□□□ 0.74
PHRF1-201ENST00000264555 GRM8O00222 908 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 EXOC5O00471 708 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
PHRF1-201ENST00000264555 DACH1Q9UI36 760 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 CCP110O43303 1012 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 CEP57L1Q8IYX8 460 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 IP6K1Q92551 441 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 XAGE3Q8WTP9 111 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 NOL7Q9UMY1 257 aaKnown RBP19.67■□□□□ 0.74
PHRF1-201ENST00000264555 MSH6P52701 1360 aa19.67■□□□□ 0.74
PHRF1-201ENST00000264555 HMG20BQ9P0W2 317 aa19.66■□□□□ 0.74
PHRF1-201ENST00000264555 SBNO1A3KN83 1393 aa19.66■□□□□ 0.74
PHRF1-201ENST00000264555 MTERF4Q7Z6M4 381 aaKnown RBP19.66■□□□□ 0.74
PHRF1-201ENST00000264555 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
PHRF1-201ENST00000264555 COPS6Q7L5N1 327 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 ABCF2Q9UG63 623 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 MAP3K12Q12852 859 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 BABAM1Q9NWV8 329 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 GCP02774 474 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 PLEKHM2Q8IWE5 1019 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 TMX3Q96JJ7 454 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 ARGLU1Q9NWB6 273 aaPredicted RBP19.65■□□□□ 0.74
PHRF1-201ENST00000264555 SERPINC1P01008 464 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 LINS1Q8NG48 757 aa19.65■□□□□ 0.74
PHRF1-201ENST00000264555 GOLIM4O00461 696 aa19.64■□□□□ 0.74
PHRF1-201ENST00000264555 STX6O43752 255 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms