RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ANKRD20A12PQ8NF67 263 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 ROBO2Q9HCK4 1378 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 MBD3O95983 291 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 MYL6BP14649 208 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 RAB3GAP1Q15042 981 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 SCAF11Q99590 1463 aaKnown RBP9.94□□□□□ -0.82
LDB3-201ENST00000263066 ANXA1P04083 346 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 ANKRD24Q8TF21 1146 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 JRKLQ9Y4A0 524 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.94□□□□□ -0.82
LDB3-201ENST00000263066 A0A1B0GUL7 405 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 H0YHG0 523 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 DHX16O60231 1041 aaKnown RBP9.94□□□□□ -0.82
LDB3-201ENST00000263066 CASQ1P31415 396 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 SARNPP82979 210 aaKnown RBP9.94□□□□□ -0.82
LDB3-201ENST00000263066 GLI2P10070 1586 aa9.94□□□□□ -0.82
LDB3-201ENST00000263066 CAPN2P17655 700 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 ARID4AP29374 1257 aaPredicted RBP9.93□□□□□ -0.82
LDB3-201ENST00000263066 BICDL1Q6ZP65 573 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 DNAAF4Q8WXU2 420 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 CCDC85AQ96PX6 553 aaPredicted RBP9.93□□□□□ -0.82
LDB3-201ENST00000263066 BMS1Q14692 1282 aaKnown RBP9.93□□□□□ -0.82
LDB3-201ENST00000263066 CNKSR2Q8WXI2 1034 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 PTPRTO14522 1441 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 TRPM2O94759 1503 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 RDXP35241 583 aaKnown RBP9.93□□□□□ -0.82
LDB3-201ENST00000263066 MAP2K2P36507 400 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 FAM43BQ6ZT52 329 aaPredicted RBP9.93□□□□□ -0.82
LDB3-201ENST00000263066 LNPKQ9C0E8 428 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 USP19O94966 1318 aa9.93□□□□□ -0.82
LDB3-201ENST00000263066 SLC39A6Q13433 755 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 GOLGA6L4A6NEF3 574 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 SLFN14P0C7P3 912 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 BIRC2Q13490 618 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 FAM98CQ17RN3 349 aaKnown RBP9.92□□□□□ -0.82
LDB3-201ENST00000263066 RPAINQ86UA6 219 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 ST18O60284 1047 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 MNS1Q8NEH6 495 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 RUNDC1Q96C34 613 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 NEURL4Q96JN8 1562 aa9.92□□□□□ -0.82
LDB3-201ENST00000263066 EFCAB6Q5THR3 1501 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 TRIM66O15016 1216 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 NRDCO43847 1150 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 CABP4P57796 275 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 SYT10Q6XYQ8 523 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 YY1AP1Q9H869 796 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 ZNF445P59923 1031 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 SLC20A2Q08357 652 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
LDB3-201ENST00000263066 ZNF397Q8NF99 534 aaPredicted RBP9.91□□□□□ -0.82
LDB3-201ENST00000263066 CAMSAP1Q5T5Y3 1602 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 TPM3P06753 285 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 KCNQ4P56696 695 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
LDB3-201ENST00000263066 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 TRIM5Q9C035 493 aa9.91□□□□□ -0.82
LDB3-201ENST00000263066 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
LDB3-201ENST00000263066 ATP6V1AP38606 617 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.82
LDB3-201ENST00000263066 NAA30Q147X3 362 aaPredicted RBP9.9□□□□□ -0.82
LDB3-201ENST00000263066 TMCO3Q6UWJ1 677 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 A0A1W2PP64 1363 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 NPHP4O75161 1426 aaPredicted RBP9.9□□□□□ -0.82
LDB3-201ENST00000263066 ERVK-7P63135 1459 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 NRXN1Q9ULB1 1477 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 MYO1CO00159 1063 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 SETD1BQ9UPS6 1966 aaKnown RBP9.9□□□□□ -0.82
LDB3-201ENST00000263066 LMTK2Q8IWU2 1503 aa9.9□□□□□ -0.82
LDB3-201ENST00000263066 MAP3K19Q56UN5 1328 aa9.9□□□□□ -0.83
LDB3-201ENST00000263066 HCLS1P14317 486 aaPredicted RBP9.9□□□□□ -0.83
LDB3-201ENST00000263066 ZSCAN26Q16670 478 aa9.9□□□□□ -0.83
LDB3-201ENST00000263066 PLEKHO1Q53GL0 409 aaPredicted RBP9.9□□□□□ -0.83
LDB3-201ENST00000263066 KCNH5Q8NCM2 988 aa9.9□□□□□ -0.83
LDB3-201ENST00000263066 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
LDB3-201ENST00000263066 ST7Q9NRC1 585 aa9.89□□□□□ -0.83
LDB3-201ENST00000263066 ZNF853P0CG23 659 aa9.89□□□□□ -0.83
LDB3-201ENST00000263066 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
LDB3-201ENST00000263066 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
LDB3-201ENST00000263066 EXOC5O00471 708 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 SATB1Q01826 763 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 KRT24Q2M2I5 525 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 DDX41Q9UJV9 622 aaKnown RBP9.88□□□□□ -0.83
LDB3-201ENST00000263066 ABCC3O15438 1527 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 ASXL1Q8IXJ9 1541 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 RALGAPBQ86X10 1494 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 CALR3Q96L12 384 aaKnown RBP9.88□□□□□ -0.83
LDB3-201ENST00000263066 TRMT1Q9NXH9 659 aaKnown RBP9.88□□□□□ -0.83
LDB3-201ENST00000263066 SF3B2Q13435 895 aaKnown RBP9.88□□□□□ -0.83
LDB3-201ENST00000263066 MICALL1Q8N3F8 863 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 FAM184AQ8NB25 1140 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 NRXN3Q9Y4C0 1643 aa9.88□□□□□ -0.83
LDB3-201ENST00000263066 USP8P40818 1118 aa9.87□□□□□ -0.83
LDB3-201ENST00000263066 DNAJC21Q5F1R6 531 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms