RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
GSDMD-201ENST00000262580 SNRPA1P09661 255 aaKnown RBP23.31■■□□□ 1.32
GSDMD-201ENST00000262580 PIGBQ92521 554 aa23.3■■□□□ 1.32
GSDMD-201ENST00000262580 AFF2P51816 1311 aa23.29■■□□□ 1.32
GSDMD-201ENST00000262580 PXDNLA1KZ92 1463 aa23.29■■□□□ 1.32
GSDMD-201ENST00000262580 SLC4A10Q6U841 1118 aa23.29■■□□□ 1.32
GSDMD-201ENST00000262580 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
GSDMD-201ENST00000262580 THSD7AQ9UPZ6 1657 aa23.29■■□□□ 1.32
GSDMD-201ENST00000262580 BCL9O00512 1426 aa23.29■■□□□ 1.32
GSDMD-201ENST00000262580 USP16Q9Y5T5 823 aa23.28■■□□□ 1.32
GSDMD-201ENST00000262580 PDIA6Q15084 440 aa23.27■■□□□ 1.32
GSDMD-201ENST00000262580 CHMP4BQ9H444 224 aaKnown RBP23.27■■□□□ 1.32
GSDMD-201ENST00000262580 C1orf115Q9H7X2 142 aa23.27■■□□□ 1.32
GSDMD-201ENST00000262580 DDX21Q9NR30 783 aaKnown RBP eCLIP23.27■■□□□ 1.32
GSDMD-201ENST00000262580 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
GSDMD-201ENST00000262580 CCT4P50991 539 aaKnown RBP23.26■■□□□ 1.31
GSDMD-201ENST00000262580 ASAP1Q9ULH1 1129 aa23.26■■□□□ 1.31
GSDMD-201ENST00000262580 PTCD1O75127 700 aaKnown RBP23.25■■□□□ 1.31
GSDMD-201ENST00000262580 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
GSDMD-201ENST00000262580 ATG3Q9NT62 314 aa23.24■■□□□ 1.31
GSDMD-201ENST00000262580 HYPKQ9NX55 129 aa23.24■■□□□ 1.31
GSDMD-201ENST00000262580 ATRNO75882 1429 aa23.24■■□□□ 1.31
GSDMD-201ENST00000262580 ADCY9O60503 1353 aa23.24■■□□□ 1.31
GSDMD-201ENST00000262580 SKAP1Q86WV1 359 aa23.24■■□□□ 1.31
GSDMD-201ENST00000262580 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
GSDMD-201ENST00000262580 MYL6BP14649 208 aa23.22■■□□□ 1.31
GSDMD-201ENST00000262580 PIP4K2AP48426 406 aaPredicted RBP23.22■■□□□ 1.31
GSDMD-201ENST00000262580 MEIS3Q99687 375 aa23.22■■□□□ 1.31
GSDMD-201ENST00000262580 PI4KAP2A4QPH2 592 aa23.22■■□□□ 1.31
GSDMD-201ENST00000262580 PI4KAP1Q8N8J0 262 aa23.22■■□□□ 1.31
GSDMD-201ENST00000262580 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
GSDMD-201ENST00000262580 RWDD1Q9H446 243 aaPredicted RBP23.22■■□□□ 1.31
GSDMD-201ENST00000262580 A0A0G2JS52 829 aa23.21■■□□□ 1.31
GSDMD-201ENST00000262580 MYT1Q01538 1121 aa23.21■■□□□ 1.31
GSDMD-201ENST00000262580 HDAC1Q13547 482 aaPredicted RBP23.2■■□□□ 1.3
GSDMD-201ENST00000262580 LRP10Q7Z4F1 713 aa23.2■■□□□ 1.3
GSDMD-201ENST00000262580 DNAAF4Q8WXU2 420 aa23.2■■□□□ 1.3
GSDMD-201ENST00000262580 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
GSDMD-201ENST00000262580 ATP10DQ9P241 1426 aa23.19■■□□□ 1.3
GSDMD-201ENST00000262580 AIMP1Q12904 312 aaKnown RBP23.19■■□□□ 1.3
GSDMD-201ENST00000262580 TRPC5Q9UL62 973 aaPredicted RBP23.18■■□□□ 1.3
GSDMD-201ENST00000262580 TJP1Q07157 1748 aa23.17■■□□□ 1.3
GSDMD-201ENST00000262580 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
GSDMD-201ENST00000262580 XAGE3Q8WTP9 111 aa23.17■■□□□ 1.3
GSDMD-201ENST00000262580 RBM42Q9BTD8 480 aaKnown RBP23.17■■□□□ 1.3
GSDMD-201ENST00000262580 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
GSDMD-201ENST00000262580 ERBB4Q15303 1308 aa23.17■■□□□ 1.3
GSDMD-201ENST00000262580 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
GSDMD-201ENST00000262580 BEND3Q5T5X7 828 aa23.16■■□□□ 1.3
GSDMD-201ENST00000262580 NBPF14Q5TI25 921 aa23.16■■□□□ 1.3
GSDMD-201ENST00000262580 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
GSDMD-201ENST00000262580 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
GSDMD-201ENST00000262580 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
GSDMD-201ENST00000262580 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
GSDMD-201ENST00000262580 COPS6Q7L5N1 327 aa23.15■■□□□ 1.3
GSDMD-201ENST00000262580 DNAJC10Q8IXB1 793 aa23.15■■□□□ 1.3
GSDMD-201ENST00000262580 SIRT2Q8IXJ6 389 aa23.15■■□□□ 1.3
GSDMD-201ENST00000262580 SLC4A9Q96Q91 983 aa23.15■■□□□ 1.3
GSDMD-201ENST00000262580 ARFGEF2Q9Y6D5 1785 aa23.15■■□□□ 1.3
GSDMD-201ENST00000262580 DDX58O95786 925 aaKnown RBP23.14■■□□□ 1.3
GSDMD-201ENST00000262580 A1BGP04217 495 aa23.14■■□□□ 1.3
GSDMD-201ENST00000262580 KCNQ2O43526 872 aa23.12■■□□□ 1.29
GSDMD-201ENST00000262580 NUP188Q5SRE5 1749 aa23.12■■□□□ 1.29
GSDMD-201ENST00000262580 CEP85Q6P2H3 762 aa23.12■■□□□ 1.29
GSDMD-201ENST00000262580 USP44Q9H0E7 712 aa23.12■■□□□ 1.29
GSDMD-201ENST00000262580 RIC3Q7Z5B4 369 aa23.11■■□□□ 1.29
GSDMD-201ENST00000262580 TEX13AQ9BXU3 409 aaPredicted RBP23.11■■□□□ 1.29
GSDMD-201ENST00000262580 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
GSDMD-201ENST00000262580 NHSQ6T4R5 1651 aa23.1■■□□□ 1.29
GSDMD-201ENST00000262580 GNAI3P08754 354 aa23.1■■□□□ 1.29
GSDMD-201ENST00000262580 SMC5Q8IY18 1101 aa23.1■■□□□ 1.29
GSDMD-201ENST00000262580 ANKRD44Q8N8A2 993 aa23.1■■□□□ 1.29
GSDMD-201ENST00000262580 PDZRN3Q9UPQ7 1066 aa23.1■■□□□ 1.29
GSDMD-201ENST00000262580 ONECUT3O60422 494 aaPredicted RBP23.09■■□□□ 1.29
GSDMD-201ENST00000262580 GNAI2P04899 355 aa23.09■■□□□ 1.29
GSDMD-201ENST00000262580 CICQ96RK0 1608 aaPredicted RBP23.09■■□□□ 1.29
GSDMD-201ENST00000262580 CWF19L2Q2TBE0 894 aaKnown RBP23.09■■□□□ 1.29
GSDMD-201ENST00000262580 RGS3P49796 1198 aa23.08■■□□□ 1.29
GSDMD-201ENST00000262580 FAM182BQ5T319 152 aa23.08■■□□□ 1.29
GSDMD-201ENST00000262580 ANKRD13DQ6ZTN6 518 aa23.08■■□□□ 1.29
GSDMD-201ENST00000262580 RPAP2Q8IXW5 612 aaPredicted RBP23.08■■□□□ 1.29
GSDMD-201ENST00000262580 SEPT12Q8IYM1 358 aa23.08■■□□□ 1.29
GSDMD-201ENST00000262580 PALLDQ8WX93 1383 aa23.08■■□□□ 1.29
GSDMD-201ENST00000262580 TSHZ2Q9NRE2 1034 aa23.08■■□□□ 1.29
GSDMD-201ENST00000262580 ALDH1L1O75891 902 aa23.07■■□□□ 1.28
GSDMD-201ENST00000262580 STARD3NLO95772 234 aa23.07■■□□□ 1.28
GSDMD-201ENST00000262580 AFDNP55196 1824 aaKnown RBP23.07■■□□□ 1.28
GSDMD-201ENST00000262580 UBTFL1P0CB47 393 aaPredicted RBP23.06■■□□□ 1.28
GSDMD-201ENST00000262580 TTLL7Q6ZT98 887 aa23.06■■□□□ 1.28
GSDMD-201ENST00000262580 LINS1Q8NG48 757 aa23.06■■□□□ 1.28
GSDMD-201ENST00000262580 LRRFIP2Q9Y608 721 aaKnown RBP23.06■■□□□ 1.28
GSDMD-201ENST00000262580 BTAF1O14981 1849 aa23.06■■□□□ 1.28
GSDMD-201ENST00000262580 IGKV5-2P06315 115 aa23.06■■□□□ 1.28
GSDMD-201ENST00000262580 NBPF7P0C2Y1 421 aaPredicted RBP23.06■■□□□ 1.28
GSDMD-201ENST00000262580 CYP19A1P11511 503 aaPredicted RBP23.06■■□□□ 1.28
GSDMD-201ENST00000262580 MYD88Q99836 296 aa23.06■■□□□ 1.28
GSDMD-201ENST00000262580 METTL22Q9BUU2 404 aaPredicted RBP23.06■■□□□ 1.28
GSDMD-201ENST00000262580 SBF2Q86WG5 1849 aa23.05■■□□□ 1.28
GSDMD-201ENST00000262580 PLBD2Q8NHP8 589 aa23.05■■□□□ 1.28
GSDMD-201ENST00000262580 PTF1AQ7RTS3 328 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms