RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 PPP4R2Q9NY27 417 aa22.66■■□□□ 1.22
CCDC115-201ENST00000259229 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
CCDC115-201ENST00000259229 ZNF772Q68DY9 489 aaPredicted RBP22.65■■□□□ 1.22
CCDC115-201ENST00000259229 MS4A1P11836 297 aa22.64■■□□□ 1.22
CCDC115-201ENST00000259229 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.22
CCDC115-201ENST00000259229 TMEM57Q8N5G2 664 aa22.64■■□□□ 1.22
CCDC115-201ENST00000259229 USP16Q9Y5T5 823 aa22.64■■□□□ 1.22
CCDC115-201ENST00000259229 BTAF1O14981 1849 aa22.64■■□□□ 1.21
CCDC115-201ENST00000259229 FLIIQ13045 1269 aa22.64■■□□□ 1.21
CCDC115-201ENST00000259229 MVPQ14764 893 aaKnown RBP22.64■■□□□ 1.21
CCDC115-201ENST00000259229 PDIA6Q15084 440 aa22.64■■□□□ 1.21
CCDC115-201ENST00000259229 PROSER3Q2NL68 480 aa22.64■■□□□ 1.21
CCDC115-201ENST00000259229 SYTL4Q96C24 671 aaPredicted RBP22.64■■□□□ 1.21
CCDC115-201ENST00000259229 API5Q9BZZ5 524 aaKnown RBP22.64■■□□□ 1.21
CCDC115-201ENST00000259229 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
CCDC115-201ENST00000259229 CHMP4AQ9BY43 222 aa22.63■■□□□ 1.21
CCDC115-201ENST00000259229 KCNQ2O43526 872 aa22.62■■□□□ 1.21
CCDC115-201ENST00000259229 ANXA1P04083 346 aa22.62■■□□□ 1.21
CCDC115-201ENST00000259229 PHAXQ9H814 394 aaKnown RBP22.62■■□□□ 1.21
CCDC115-201ENST00000259229 DBF4Q9UBU7 674 aaPredicted RBP22.62■■□□□ 1.21
CCDC115-201ENST00000259229 ZNF831Q5JPB2 1677 aa22.62■■□□□ 1.21
CCDC115-201ENST00000259229 LRP10Q7Z4F1 713 aa22.61■■□□□ 1.21
CCDC115-201ENST00000259229 SLC4A9Q96Q91 983 aa22.61■■□□□ 1.21
CCDC115-201ENST00000259229 RGS17Q9UGC6 210 aaPredicted RBP22.61■■□□□ 1.21
CCDC115-201ENST00000259229 FAM182BQ5T319 152 aa22.6■■□□□ 1.21
CCDC115-201ENST00000259229 PXDNLA1KZ92 1463 aa22.6■■□□□ 1.21
CCDC115-201ENST00000259229 RBM6P78332 1123 aaKnown RBP22.6■■□□□ 1.21
CCDC115-201ENST00000259229 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
CCDC115-201ENST00000259229 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
CCDC115-201ENST00000259229 PTF1AQ7RTS3 328 aa22.58■■□□□ 1.21
CCDC115-201ENST00000259229 COL5A3P25940 1745 aaPredicted RBP22.58■■□□□ 1.2
CCDC115-201ENST00000259229 RREB1Q92766 1687 aa22.58■■□□□ 1.2
CCDC115-201ENST00000259229 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
CCDC115-201ENST00000259229 ITPRIPQ8IWB1 547 aa22.57■■□□□ 1.2
CCDC115-201ENST00000259229 F6X3S4 739 aa22.57■■□□□ 1.2
CCDC115-201ENST00000259229 INTS3Q68E01 1043 aaKnown RBP22.57■■□□□ 1.2
CCDC115-201ENST00000259229 ADCY9O60503 1353 aa22.56■■□□□ 1.2
CCDC115-201ENST00000259229 ERBB4Q15303 1308 aa22.56■■□□□ 1.2
CCDC115-201ENST00000259229 LY75O60449 1722 aa22.56■■□□□ 1.2
CCDC115-201ENST00000259229 FKBP5Q13451 457 aaPredicted RBP22.56■■□□□ 1.2
CCDC115-201ENST00000259229 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
CCDC115-201ENST00000259229 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 NBPF14Q5TI25 921 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
CCDC115-201ENST00000259229 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 DDX19BQ9UMR2 479 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
CCDC115-201ENST00000259229 ARFGEF2Q9Y6D5 1785 aa22.54■■□□□ 1.2
CCDC115-201ENST00000259229 PIP4K2AP48426 406 aaPredicted RBP22.54■■□□□ 1.2
CCDC115-201ENST00000259229 RBM42Q9BTD8 480 aaKnown RBP22.54■■□□□ 1.2
CCDC115-201ENST00000259229 ZBTB7BO15156 539 aaPredicted RBP22.52■■□□□ 1.2
CCDC115-201ENST00000259229 KRT27Q7Z3Y8 459 aa22.52■■□□□ 1.2
CCDC115-201ENST00000259229 A1BGP04217 495 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 MYL6BP14649 208 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 AAMPQ13685 434 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 POTEAQ6S8J7 498 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 CCDC136Q96JN2 1154 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
CCDC115-201ENST00000259229 ZBTB40Q9NUA8 1239 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 ATP10DQ9P241 1426 aa22.51■■□□□ 1.19
CCDC115-201ENST00000259229 LOC102724428A0A0B4J2F2 783 aa22.49■■□□□ 1.19
CCDC115-201ENST00000259229 CYP19A1P11511 503 aaPredicted RBP22.49■■□□□ 1.19
CCDC115-201ENST00000259229 SIK1P57059 783 aa22.49■■□□□ 1.19
CCDC115-201ENST00000259229 SMARCC1Q92922 1105 aaPredicted RBP22.49■■□□□ 1.19
CCDC115-201ENST00000259229 PI4KAP2A4QPH2 592 aa22.49■■□□□ 1.19
CCDC115-201ENST00000259229 RXRBP28702 533 aa22.49■■□□□ 1.19
CCDC115-201ENST00000259229 PI4KAP1Q8N8J0 262 aa22.49■■□□□ 1.19
CCDC115-201ENST00000259229 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
CCDC115-201ENST00000259229 EP400Q96L91 3159 aa22.48■■□□□ 1.19
CCDC115-201ENST00000259229 MYH14Q7Z406 1995 aaKnown RBP22.48■■□□□ 1.19
CCDC115-201ENST00000259229 CCT4P50991 539 aaKnown RBP22.48■■□□□ 1.19
CCDC115-201ENST00000259229 ITPK1Q13572 414 aa22.48■■□□□ 1.19
CCDC115-201ENST00000259229 SLC4A10Q6U841 1118 aa22.48■■□□□ 1.19
CCDC115-201ENST00000259229 COPS6Q7L5N1 327 aa22.48■■□□□ 1.19
CCDC115-201ENST00000259229 PCDHB15Q9Y5E8 787 aa22.48■■□□□ 1.19
CCDC115-201ENST00000259229 TAF1LQ8IZX4 1826 aa22.47■■□□□ 1.19
CCDC115-201ENST00000259229 KSR2Q6VAB6 950 aa22.47■■□□□ 1.19
CCDC115-201ENST00000259229 DNAAF4Q8WXU2 420 aa22.47■■□□□ 1.19
CCDC115-201ENST00000259229 KDM2BQ8NHM5 1336 aa22.46■■□□□ 1.19
CCDC115-201ENST00000259229 STARD3NLO95772 234 aa22.46■■□□□ 1.19
CCDC115-201ENST00000259229 AIMP1Q12904 312 aaKnown RBP22.46■■□□□ 1.19
CCDC115-201ENST00000259229 BEND3Q5T5X7 828 aa22.46■■□□□ 1.19
CCDC115-201ENST00000259229 FAM196AQ6ZSG2 479 aa22.46■■□□□ 1.19
CCDC115-201ENST00000259229 MAP3K2Q9Y2U5 619 aa22.46■■□□□ 1.19
CCDC115-201ENST00000259229 SOCS7O14512 581 aa22.44■■□□□ 1.18
CCDC115-201ENST00000259229 ATP6V1AP38606 617 aa22.44■■□□□ 1.18
CCDC115-201ENST00000259229 MEIS3Q99687 375 aa22.44■■□□□ 1.18
CCDC115-201ENST00000259229 BCL11BQ9C0K0 894 aaPredicted RBP22.44■■□□□ 1.18
CCDC115-201ENST00000259229 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
CCDC115-201ENST00000259229 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
CCDC115-201ENST00000259229 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
CCDC115-201ENST00000259229 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
CCDC115-201ENST00000259229 TNS1Q9HBL0 1735 aaKnown RBP22.42■■□□□ 1.18
CCDC115-201ENST00000259229 IGHDP01880 384 aa22.41■■□□□ 1.18
CCDC115-201ENST00000259229 INTS5Q6P9B9 1019 aaKnown RBP22.41■■□□□ 1.18
CCDC115-201ENST00000259229 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
CCDC115-201ENST00000259229 CHMP4BQ9H444 224 aaKnown RBP22.41■■□□□ 1.18
CCDC115-201ENST00000259229 IBTKQ9P2D0 1353 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms