RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
CSHL1-201ENST00000259003 DALRD3Q5D0E6 543 aaKnown RBP17.31■□□□□ 0.36
CSHL1-201ENST00000259003 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
CSHL1-201ENST00000259003 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
CSHL1-201ENST00000259003 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
CSHL1-201ENST00000259003 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
CSHL1-201ENST00000259003 MRC1P22897 1456 aa17.31■□□□□ 0.36
CSHL1-201ENST00000259003 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
CSHL1-201ENST00000259003 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
CSHL1-201ENST00000259003 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
CSHL1-201ENST00000259003 NFIXQ14938 502 aa17.3■□□□□ 0.36
CSHL1-201ENST00000259003 RRAGCQ9HB90 399 aa17.3■□□□□ 0.36
CSHL1-201ENST00000259003 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
CSHL1-201ENST00000259003 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
CSHL1-201ENST00000259003 TIAM2Q8IVF5 1701 aa17.29■□□□□ 0.36
CSHL1-201ENST00000259003 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
CSHL1-201ENST00000259003 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
CSHL1-201ENST00000259003 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
CSHL1-201ENST00000259003 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
CSHL1-201ENST00000259003 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
CSHL1-201ENST00000259003 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
CSHL1-201ENST00000259003 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.35
CSHL1-201ENST00000259003 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
CSHL1-201ENST00000259003 ZPR1O75312 459 aa17.26■□□□□ 0.35
CSHL1-201ENST00000259003 COL15A1P39059 1388 aa17.26■□□□□ 0.35
CSHL1-201ENST00000259003 FER1L6Q2WGJ9 1857 aa17.25■□□□□ 0.35
CSHL1-201ENST00000259003 CCDC24Q8N4L8 307 aa17.25■□□□□ 0.35
CSHL1-201ENST00000259003 NARFQ9UHQ1 456 aa17.25■□□□□ 0.35
CSHL1-201ENST00000259003 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
CSHL1-201ENST00000259003 CNGB1Q14028 1251 aaPredicted RBP17.24■□□□□ 0.35
CSHL1-201ENST00000259003 C16orf71Q8IYS4 520 aaPredicted RBP17.24■□□□□ 0.35
CSHL1-201ENST00000259003 SLX4Q8IY92 1834 aa17.24■□□□□ 0.35
CSHL1-201ENST00000259003 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
CSHL1-201ENST00000259003 SERPINB2P05120 415 aa17.23■□□□□ 0.35
CSHL1-201ENST00000259003 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
CSHL1-201ENST00000259003 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
CSHL1-201ENST00000259003 KLRG1Q96E93 195 aa17.22■□□□□ 0.35
CSHL1-201ENST00000259003 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
CSHL1-201ENST00000259003 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
CSHL1-201ENST00000259003 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
CSHL1-201ENST00000259003 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
CSHL1-201ENST00000259003 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
CSHL1-201ENST00000259003 NFKBIEO00221 500 aa17.2■□□□□ 0.34
CSHL1-201ENST00000259003 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
CSHL1-201ENST00000259003 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
CSHL1-201ENST00000259003 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
CSHL1-201ENST00000259003 EIF5P55010 431 aaKnown RBP17.19■□□□□ 0.34
CSHL1-201ENST00000259003 FSTL1Q12841 308 aa17.19■□□□□ 0.34
CSHL1-201ENST00000259003 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
CSHL1-201ENST00000259003 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
CSHL1-201ENST00000259003 POTECB2RU33 542 aa17.18■□□□□ 0.34
CSHL1-201ENST00000259003 KCNQ3O43525 872 aa17.18■□□□□ 0.34
CSHL1-201ENST00000259003 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
CSHL1-201ENST00000259003 JMYQ8N9B5 988 aa17.18■□□□□ 0.34
CSHL1-201ENST00000259003 BCORQ6W2J9 1755 aa17.17■□□□□ 0.34
CSHL1-201ENST00000259003 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
CSHL1-201ENST00000259003 TBC1D2BQ9UPU7 963 aa17.17■□□□□ 0.34
CSHL1-201ENST00000259003 GLTPD2A6NH11 291 aa17.16■□□□□ 0.34
CSHL1-201ENST00000259003 LMNB1P20700 586 aa17.16■□□□□ 0.34
CSHL1-201ENST00000259003 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CSHL1-201ENST00000259003 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
CSHL1-201ENST00000259003 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
CSHL1-201ENST00000259003 A1BGP04217 495 aa17.15■□□□□ 0.34
CSHL1-201ENST00000259003 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
CSHL1-201ENST00000259003 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
CSHL1-201ENST00000259003 H0YIN7 160 aa17.14■□□□□ 0.33
CSHL1-201ENST00000259003 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
CSHL1-201ENST00000259003 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSHL1-201ENST00000259003 HEG1Q9ULI3 1381 aa17.14■□□□□ 0.33
CSHL1-201ENST00000259003 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
CSHL1-201ENST00000259003 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
CSHL1-201ENST00000259003 C21orf2O43822 256 aa17.13■□□□□ 0.33
CSHL1-201ENST00000259003 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
CSHL1-201ENST00000259003 ZNF790Q6PG37 636 aa17.13■□□□□ 0.33
CSHL1-201ENST00000259003 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
CSHL1-201ENST00000259003 CAPN15O75808 1086 aa17.12■□□□□ 0.33
CSHL1-201ENST00000259003 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
CSHL1-201ENST00000259003 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
CSHL1-201ENST00000259003 STARD3NLO95772 234 aa17.11■□□□□ 0.33
CSHL1-201ENST00000259003 POTEIP0CG38 1075 aa17.11■□□□□ 0.33
CSHL1-201ENST00000259003 POTEJP0CG39 1038 aa17.11■□□□□ 0.33
CSHL1-201ENST00000259003 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
CSHL1-201ENST00000259003 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
CSHL1-201ENST00000259003 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
CSHL1-201ENST00000259003 GNAT3A8MTJ3 354 aa17.09■□□□□ 0.33
CSHL1-201ENST00000259003 TEFQ10587 303 aa17.09■□□□□ 0.33
CSHL1-201ENST00000259003 BRIP1Q9BX63 1249 aa17.09■□□□□ 0.33
CSHL1-201ENST00000259003 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
CSHL1-201ENST00000259003 A0A087WZG4 1122 aa17.07■□□□□ 0.32
CSHL1-201ENST00000259003 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
CSHL1-201ENST00000259003 HSPA1AP0DMV8 641 aaKnown RBP17.07■□□□□ 0.32
CSHL1-201ENST00000259003 HSPA1BP0DMV9 641 aaKnown RBP17.07■□□□□ 0.32
CSHL1-201ENST00000259003 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
CSHL1-201ENST00000259003 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
CSHL1-201ENST00000259003 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
CSHL1-201ENST00000259003 NUP98P52948 1817 aa17.06■□□□□ 0.32
CSHL1-201ENST00000259003 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
CSHL1-201ENST00000259003 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
CSHL1-201ENST00000259003 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
CSHL1-201ENST00000259003 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms