RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 LETM1O95202 739 aaPredicted RBP16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 TSG101Q99816 390 aa16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 TTF1Q15361 905 aaPredicted RBP16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
ZC3H4-201ENST00000253048 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 SERPINC1P01008 464 aa16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 PABPN1LA6NDY0 278 aaKnown RBP16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 WDR63Q8IWG1 891 aa16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
ZC3H4-201ENST00000253048 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 KIF14Q15058 1648 aa16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 SLC4A8Q2Y0W8 1093 aa16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 ZNF771Q7L3S4 317 aaPredicted RBP16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 TRAPPC3LQ5T215 181 aa16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 CRNKL1Q9BZJ0 848 aaKnown RBP16.74■□□□□ 0.27
ZC3H4-201ENST00000253048 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 RBM17Q96I25 401 aaKnown RBP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 KAT14Q9H8E8 782 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 ARGLU1Q9NWB6 273 aaPredicted RBP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 NIP7Q9Y221 180 aaKnown RBP eCLIP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 FANCAO15360 1455 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 TRAF1Q13077 416 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 PICALMQ13492 652 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 DHX8Q14562 1220 aaKnown RBP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 HOMER2Q9NSB8 354 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 IL2RBP14784 551 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 TAF12Q16514 161 aa16.73■□□□□ 0.27
ZC3H4-201ENST00000253048 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 ERCC4Q92889 916 aaPredicted RBP16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 COMMD10Q9Y6G5 202 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 TSPY2A6NKD2 308 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 RAB11FIP3O75154 756 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 GBP2P32456 591 aaPredicted RBP16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 IDI1Q13907 227 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 HSP90B2PQ58FF3 399 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 NOD1Q9Y239 953 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 TTC21BQ7Z4L5 1316 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 JAKMIP3Q5VZ66 844 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 KIF1BPQ96EK5 621 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 BICD1Q96G01 975 aa16.72■□□□□ 0.27
ZC3H4-201ENST00000253048 CCDC194A0A1B0GVG4 234 aa16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 CCP110O43303 1012 aa16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 NLRP5P59047 1200 aa16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 TCIRG1Q13488 830 aa16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 EAPPQ56P03 285 aaPredicted RBP16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.27
ZC3H4-201ENST00000253048 ZNF213O14771 459 aa16.71■□□□□ 0.26
ZC3H4-201ENST00000253048 RIMBP2O15034 1052 aa16.71■□□□□ 0.26
ZC3H4-201ENST00000253048 KIF5BP33176 963 aa16.71■□□□□ 0.26
ZC3H4-201ENST00000253048 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 APBA3O96018 575 aa16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 RABEP1Q15276 862 aa16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 EZRP15311 586 aaKnown RBP16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
ZC3H4-201ENST00000253048 FIBPO43427 364 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 GNPATO15228 680 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 LPXNO60711 386 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 STXBP4Q6ZWJ1 553 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 BOLA2Q9H3K6 86 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 KIF20AO95235 890 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
ZC3H4-201ENST00000253048 ZSCAN31Q96LW9 406 aaPredicted RBP16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 PLCD4Q9BRC7 762 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 USP21Q9UK80 565 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 ACEP12821 1306 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
ZC3H4-201ENST00000253048 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 ZNF354CQ86Y25 554 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
ZC3H4-201ENST00000253048 KIF22Q14807 665 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms