RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 LTKP29376 864 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
SIN3B-201ENST00000248054 PCDHB15Q9Y5E8 787 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 CCDC73Q6ZRK6 1079 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 TSPOAP1O95153 1857 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 HOXB7P09629 217 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 NUTM1Q86Y26 1132 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
SIN3B-201ENST00000248054 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
SIN3B-201ENST00000248054 FAM177BA6PVY3 158 aa18.74■□□□□ 0.59
SIN3B-201ENST00000248054 MARCH6O60337 910 aa18.73■□□□□ 0.59
SIN3B-201ENST00000248054 IGHMBP2P38935 993 aaKnown RBP18.73■□□□□ 0.59
SIN3B-201ENST00000248054 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
SIN3B-201ENST00000248054 CWC27Q6UX04 472 aaKnown RBP18.73■□□□□ 0.59
SIN3B-201ENST00000248054 PIP4K2BP78356 416 aa18.72■□□□□ 0.59
SIN3B-201ENST00000248054 BRMS1Q9HCU9 246 aa18.72■□□□□ 0.59
SIN3B-201ENST00000248054 TTC22Q5TAA0 569 aa18.72■□□□□ 0.59
SIN3B-201ENST00000248054 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
SIN3B-201ENST00000248054 ZBTB40Q9NUA8 1239 aa18.72■□□□□ 0.59
SIN3B-201ENST00000248054 A0A087WZG4 1122 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 ECHDC1Q9NTX5 307 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 METP08581 1390 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 CCDC70Q6NSX1 233 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 CWC25Q9NXE8 425 aaPredicted RBP18.71■□□□□ 0.59
SIN3B-201ENST00000248054 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
SIN3B-201ENST00000248054 TPD52L1Q16890 204 aaPredicted RBP18.71■□□□□ 0.59
SIN3B-201ENST00000248054 PDRG1Q9NUG6 133 aa18.71■□□□□ 0.59
SIN3B-201ENST00000248054 DCAF5Q96JK2 942 aa18.71■□□□□ 0.58
SIN3B-201ENST00000248054 LAMC1P11047 1609 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
SIN3B-201ENST00000248054 ANKRD13DQ6ZTN6 518 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 EVI5LQ96CN4 794 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 CHPF2Q9P2E5 772 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 IFIT5Q13325 482 aaKnown RBP18.7■□□□□ 0.58
SIN3B-201ENST00000248054 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
SIN3B-201ENST00000248054 CHL1O00533 1208 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 ZNF396Q96N95 335 aaPredicted RBP18.69■□□□□ 0.58
SIN3B-201ENST00000248054 SMC5Q8IY18 1101 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 CCDC47Q96A33 483 aaKnown RBP18.69■□□□□ 0.58
SIN3B-201ENST00000248054 MEIS3Q99687 375 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
SIN3B-201ENST00000248054 MADDQ8WXG6 1647 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 ANKRD20A12PQ8NF67 263 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 SETBP1Q9Y6X0 1596 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 METTL24Q5JXM2 366 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 E9PCH4 1651 aa18.69■□□□□ 0.58
SIN3B-201ENST00000248054 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
SIN3B-201ENST00000248054 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
SIN3B-201ENST00000248054 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.58
SIN3B-201ENST00000248054 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
SIN3B-201ENST00000248054 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
SIN3B-201ENST00000248054 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
SIN3B-201ENST00000248054 IL2RBP14784 551 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 TBC1D9Q6ZT07 1266 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 KIF24Q5T7B8 1368 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 RLBP1P12271 317 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 LINS1Q8NG48 757 aa18.67■□□□□ 0.58
SIN3B-201ENST00000248054 IFIT1P09914 478 aaKnown RBP18.66■□□□□ 0.58
SIN3B-201ENST00000248054 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
SIN3B-201ENST00000248054 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 SH2B1Q9NRF2 756 aaPredicted RBP18.65■□□□□ 0.58
SIN3B-201ENST00000248054 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
SIN3B-201ENST00000248054 TOM1O60784 492 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 DHX8Q14562 1220 aaKnown RBP18.65■□□□□ 0.58
SIN3B-201ENST00000248054 RHPN1Q8TCX5 695 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 FBXW7Q969H0 707 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 NAT10Q9H0A0 1025 aaKnown RBP18.65■□□□□ 0.58
SIN3B-201ENST00000248054 A2ML1A8K2U0 1454 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 CDKL5O76039 1030 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 HMGB1P09429 215 aaKnown RBP18.65■□□□□ 0.58
SIN3B-201ENST00000248054 CLSTN1O94985 981 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 TEX35Q5T0J7 233 aa18.65■□□□□ 0.58
SIN3B-201ENST00000248054 RTL1A6NKG5 1358 aa18.64■□□□□ 0.58
SIN3B-201ENST00000248054 GRM8O00222 908 aa18.64■□□□□ 0.57
SIN3B-201ENST00000248054 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
SIN3B-201ENST00000248054 IMMTQ16891 758 aaKnown RBP18.64■□□□□ 0.57
SIN3B-201ENST00000248054 TRMT112Q9UI30 125 aaKnown RBP18.64■□□□□ 0.57
SIN3B-201ENST00000248054 CAVIN1Q6NZI2 390 aaKnown RBP18.64■□□□□ 0.57
SIN3B-201ENST00000248054 IPO7O95373 1038 aaKnown RBP18.63■□□□□ 0.57
SIN3B-201ENST00000248054 BBXQ8WY36 941 aaPredicted RBP18.63■□□□□ 0.57
SIN3B-201ENST00000248054 ARGLU1Q9NWB6 273 aaPredicted RBP18.63■□□□□ 0.57
SIN3B-201ENST00000248054 PRPF40AO75400 957 aaKnown RBP18.63■□□□□ 0.57
SIN3B-201ENST00000248054 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
SIN3B-201ENST00000248054 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
SIN3B-201ENST00000248054 BOLA2Q9H3K6 86 aa18.63■□□□□ 0.57
SIN3B-201ENST00000248054 KRT85P78386 507 aa18.62■□□□□ 0.57
SIN3B-201ENST00000248054 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
SIN3B-201ENST00000248054 GLI2P10070 1586 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms