RNA–Protein interactions for RNA: ENST00000246657.2

CCR7-201, Transcript of C-C motif chemokine receptor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR7, Length 2,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-201ENST00000246657 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
CCR7-201ENST00000246657 GTPBP4Q9BZE4 634 aaKnown RBP16.16■□□□□ 0.18
CCR7-201ENST00000246657 TDO2P48775 406 aa16.16■□□□□ 0.18
CCR7-201ENST00000246657 NGLY1Q96IV0 654 aa16.16■□□□□ 0.18
CCR7-201ENST00000246657 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
CCR7-201ENST00000246657 PAIP2Q9BPZ3 127 aaKnown RBP16.14■□□□□ 0.17
CCR7-201ENST00000246657 POGKQ9P215 609 aa16.14■□□□□ 0.17
CCR7-201ENST00000246657 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCR7-201ENST00000246657 METTL14Q9HCE5 456 aaKnown RBP16.14■□□□□ 0.17
CCR7-201ENST00000246657 RRAGDQ9NQL2 400 aaPredicted RBP16.14■□□□□ 0.17
CCR7-201ENST00000246657 SMC3Q9UQE7 1217 aa16.14■□□□□ 0.17
CCR7-201ENST00000246657 APLP1P51693 650 aa16.13■□□□□ 0.17
CCR7-201ENST00000246657 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
CCR7-201ENST00000246657 CALR3Q96L12 384 aaKnown RBP16.13■□□□□ 0.17
CCR7-201ENST00000246657 CCDC94Q9BW85 323 aaPredicted RBP16.13■□□□□ 0.17
CCR7-201ENST00000246657 MAF1Q9H063 256 aa16.13■□□□□ 0.17
CCR7-201ENST00000246657 QTRT2Q9H974 415 aaKnown RBP16.13■□□□□ 0.17
CCR7-201ENST00000246657 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
CCR7-201ENST00000246657 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
CCR7-201ENST00000246657 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
CCR7-201ENST00000246657 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
CCR7-201ENST00000246657 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 NSD3Q9BZ95 1437 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 KCNA1Q09470 495 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
CCR7-201ENST00000246657 FAM210AQ96ND0 272 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 RGS12O14924 1447 aa16.11■□□□□ 0.17
CCR7-201ENST00000246657 CLCN1P35523 988 aa16.1■□□□□ 0.17
CCR7-201ENST00000246657 KDM4CQ9H3R0 1056 aa16.1■□□□□ 0.17
CCR7-201ENST00000246657 KLHL42Q9P2K6 505 aa16.1■□□□□ 0.17
CCR7-201ENST00000246657 MPHOSPH10O00566 681 aaKnown RBP16.1■□□□□ 0.17
CCR7-201ENST00000246657 C1QTNF12Q5T7M4 302 aa16.1■□□□□ 0.17
CCR7-201ENST00000246657 CCDC85AQ96PX6 553 aaPredicted RBP16.1■□□□□ 0.17
CCR7-201ENST00000246657 USP21Q9UK80 565 aa16.1■□□□□ 0.17
CCR7-201ENST00000246657 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
CCR7-201ENST00000246657 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
CCR7-201ENST00000246657 POLR3AO14802 1390 aaPredicted RBP16.08■□□□□ 0.17
CCR7-201ENST00000246657 IRX5P78411 483 aaPredicted RBP16.08■□□□□ 0.16
CCR7-201ENST00000246657 FNBP4Q8N3X1 1017 aaPredicted RBP16.08■□□□□ 0.16
CCR7-201ENST00000246657 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.07■□□□□ 0.16
CCR7-201ENST00000246657 PSME1Q06323 249 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 RPAINQ86UA6 219 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 PMM1Q92871 262 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 SLC12A5Q9H2X9 1139 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 TRPC5Q9UL62 973 aaPredicted RBP16.07■□□□□ 0.16
CCR7-201ENST00000246657 CT47A1Q5JQC4 288 aaPredicted RBP16.07■□□□□ 0.16
CCR7-201ENST00000246657 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
CCR7-201ENST00000246657 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 ATRNO75882 1429 aa16.07■□□□□ 0.16
CCR7-201ENST00000246657 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
CCR7-201ENST00000246657 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
CCR7-201ENST00000246657 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCR7-201ENST00000246657 EVC2Q86UK5 1308 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 COQ9O75208 318 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 CCDC172P0C7W6 258 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
CCR7-201ENST00000246657 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
CCR7-201ENST00000246657 DRC1Q96MC2 740 aa16.05■□□□□ 0.16
CCR7-201ENST00000246657 SPOCK3Q9BQ16 436 aa16.05■□□□□ 0.16
CCR7-201ENST00000246657 NBPF3Q9H094 633 aa16.05■□□□□ 0.16
CCR7-201ENST00000246657 IRF2BPLQ9H1B7 796 aa16.05■□□□□ 0.16
CCR7-201ENST00000246657 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
CCR7-201ENST00000246657 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
CCR7-201ENST00000246657 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
CCR7-201ENST00000246657 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
CCR7-201ENST00000246657 ANKRD26Q9UPS8 1709 aa16.04■□□□□ 0.16
CCR7-201ENST00000246657 BDNFP23560 247 aa16.04■□□□□ 0.16
CCR7-201ENST00000246657 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
CCR7-201ENST00000246657 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
CCR7-201ENST00000246657 ANKRD36BQ8N2N9 1353 aa16.04■□□□□ 0.16
CCR7-201ENST00000246657 ZSCAN20P17040 1043 aaPredicted RBP16.03■□□□□ 0.16
CCR7-201ENST00000246657 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
CCR7-201ENST00000246657 PLIN1O60240 522 aa16.03■□□□□ 0.16
CCR7-201ENST00000246657 TRAK2O60296 914 aa16.03■□□□□ 0.16
CCR7-201ENST00000246657 FAM200BP0CF97 657 aa16.03■□□□□ 0.16
CCR7-201ENST00000246657 VASPP50552 380 aaPredicted RBP16.03■□□□□ 0.16
CCR7-201ENST00000246657 MYCBPQ99417 103 aaPredicted RBP16.03■□□□□ 0.16
CCR7-201ENST00000246657 TPX2Q9ULW0 747 aaKnown RBP16.03■□□□□ 0.16
CCR7-201ENST00000246657 WASLO00401 505 aaPredicted RBP16.02■□□□□ 0.16
CCR7-201ENST00000246657 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.16
CCR7-201ENST00000246657 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
CCR7-201ENST00000246657 MORC1Q86VD1 984 aa16.02■□□□□ 0.16
CCR7-201ENST00000246657 CGNL1Q0VF96 1302 aa16.02■□□□□ 0.16
CCR7-201ENST00000246657 APAF1O14727 1248 aa16.02■□□□□ 0.15
CCR7-201ENST00000246657 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms