RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 BCL9O00512 1426 aa23.62■■□□□ 1.37
SNX17-201ENST00000233575 ATRNO75882 1429 aa23.62■■□□□ 1.37
SNX17-201ENST00000233575 SNRPA1P09661 255 aaKnown RBP23.62■■□□□ 1.37
SNX17-201ENST00000233575 PRIM1P49642 420 aaKnown RBP23.62■■□□□ 1.37
SNX17-201ENST00000233575 FKBP5Q13451 457 aaPredicted RBP23.61■■□□□ 1.37
SNX17-201ENST00000233575 ACSBG1Q96GR2 724 aa23.6■■□□□ 1.37
SNX17-201ENST00000233575 DBF4Q9UBU7 674 aaPredicted RBP23.6■■□□□ 1.37
SNX17-201ENST00000233575 ATG3Q9NT62 314 aa23.6■■□□□ 1.37
SNX17-201ENST00000233575 TRPC5Q9UL62 973 aaPredicted RBP23.6■■□□□ 1.37
SNX17-201ENST00000233575 PDIA6Q15084 440 aa23.59■■□□□ 1.37
SNX17-201ENST00000233575 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
SNX17-201ENST00000233575 LAMB4A4D0S4 1761 aa23.59■■□□□ 1.37
SNX17-201ENST00000233575 PIP4K2AP48426 406 aaPredicted RBP23.57■■□□□ 1.36
SNX17-201ENST00000233575 INTS3Q68E01 1043 aaKnown RBP23.57■■□□□ 1.36
SNX17-201ENST00000233575 SLC4A10Q6U841 1118 aa23.57■■□□□ 1.36
SNX17-201ENST00000233575 CHMP4AQ9BY43 222 aa23.57■■□□□ 1.36
SNX17-201ENST00000233575 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
SNX17-201ENST00000233575 ZBTB40Q9NUA8 1239 aa23.57■■□□□ 1.36
SNX17-201ENST00000233575 QTRT2Q9H974 415 aaKnown RBP23.56■■□□□ 1.36
SNX17-201ENST00000233575 DDX21Q9NR30 783 aaKnown RBP eCLIP23.55■■□□□ 1.36
SNX17-201ENST00000233575 KDM2BQ8NHM5 1336 aa23.54■■□□□ 1.36
SNX17-201ENST00000233575 IGHDP01880 384 aa23.54■■□□□ 1.36
SNX17-201ENST00000233575 MYL6BP14649 208 aa23.54■■□□□ 1.36
SNX17-201ENST00000233575 AAMPQ13685 434 aa23.54■■□□□ 1.36
SNX17-201ENST00000233575 FAM182BQ5T319 152 aa23.54■■□□□ 1.36
SNX17-201ENST00000233575 KCNQ2O43526 872 aa23.54■■□□□ 1.36
SNX17-201ENST00000233575 LRP10Q7Z4F1 713 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 RBM42Q9BTD8 480 aaKnown RBP23.52■■□□□ 1.36
SNX17-201ENST00000233575 C1orf115Q9H7X2 142 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 HYPKQ9NX55 129 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 ADCY9O60503 1353 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 PI4KAP2A4QPH2 592 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 ONECUT3O60422 494 aaPredicted RBP23.52■■□□□ 1.36
SNX17-201ENST00000233575 PI4KAP1Q8N8J0 262 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 SLC4A9Q96Q91 983 aa23.52■■□□□ 1.36
SNX17-201ENST00000233575 AIMP1Q12904 312 aaKnown RBP23.5■■□□□ 1.35
SNX17-201ENST00000233575 NBPF26B4DH59 902 aa23.5■■□□□ 1.35
SNX17-201ENST00000233575 NBPF14Q5TI25 921 aa23.5■■□□□ 1.35
SNX17-201ENST00000233575 NBPF10Q6P3W6 841 aaKnown RBP23.5■■□□□ 1.35
SNX17-201ENST00000233575 SEPT12Q8IYM1 358 aa23.5■■□□□ 1.35
SNX17-201ENST00000233575 NBPF15Q8N660 670 aa23.5■■□□□ 1.35
SNX17-201ENST00000233575 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
SNX17-201ENST00000233575 A1BGP04217 495 aa23.49■■□□□ 1.35
SNX17-201ENST00000233575 CCT4P50991 539 aaKnown RBP23.49■■□□□ 1.35
SNX17-201ENST00000233575 PTF1AQ7RTS3 328 aa23.49■■□□□ 1.35
SNX17-201ENST00000233575 DNAJC10Q8IXB1 793 aa23.49■■□□□ 1.35
SNX17-201ENST00000233575 MEIS3Q99687 375 aa23.49■■□□□ 1.35
SNX17-201ENST00000233575 PXDNLA1KZ92 1463 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
SNX17-201ENST00000233575 XAGE3Q8WTP9 111 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 DNAAF4Q8WXU2 420 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 COPS6Q7L5N1 327 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 SKAP1Q86WV1 359 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 VSIG10Q8N0Z9 540 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 MAP3K2Q9Y2U5 619 aa23.47■■□□□ 1.35
SNX17-201ENST00000233575 FBXO41Q8TF61 875 aa23.46■■□□□ 1.35
SNX17-201ENST00000233575 KSR2Q6VAB6 950 aa23.45■■□□□ 1.35
SNX17-201ENST00000233575 TJP1Q07157 1748 aa23.45■■□□□ 1.34
SNX17-201ENST00000233575 CHMP4BQ9H444 224 aaKnown RBP23.44■■□□□ 1.34
SNX17-201ENST00000233575 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
SNX17-201ENST00000233575 BEND3Q5T5X7 828 aa23.43■■□□□ 1.34
SNX17-201ENST00000233575 EP400Q96L91 3159 aa23.43■■□□□ 1.34
SNX17-201ENST00000233575 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
SNX17-201ENST00000233575 PALLDQ8WX93 1383 aa23.42■■□□□ 1.34
SNX17-201ENST00000233575 SRCIN1Q9C0H9 1055 aa23.42■■□□□ 1.34
SNX17-201ENST00000233575 DDX58O95786 925 aaKnown RBP23.41■■□□□ 1.34
SNX17-201ENST00000233575 ZNF772Q68DY9 489 aaPredicted RBP23.41■■□□□ 1.34
SNX17-201ENST00000233575 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
SNX17-201ENST00000233575 NHSQ6T4R5 1651 aa23.41■■□□□ 1.34
SNX17-201ENST00000233575 CYP19A1P11511 503 aaPredicted RBP23.4■■□□□ 1.34
SNX17-201ENST00000233575 RIC3Q7Z5B4 369 aa23.4■■□□□ 1.34
SNX17-201ENST00000233575 SIRT2Q8IXJ6 389 aa23.4■■□□□ 1.34
SNX17-201ENST00000233575 RWDD1Q9H446 243 aaPredicted RBP23.4■■□□□ 1.34
SNX17-201ENST00000233575 ATP10DQ9P241 1426 aa23.4■■□□□ 1.34
SNX17-201ENST00000233575 SBF2Q86WG5 1849 aa23.4■■□□□ 1.34
SNX17-201ENST00000233575 HDAC1Q13547 482 aaPredicted RBP23.4■■□□□ 1.34
SNX17-201ENST00000233575 TTLL7Q6ZT98 887 aa23.4■■□□□ 1.34
SNX17-201ENST00000233575 USP44Q9H0E7 712 aa23.4■■□□□ 1.34
SNX17-201ENST00000233575 BTAF1O14981 1849 aa23.39■■□□□ 1.34
SNX17-201ENST00000233575 LOC102724428A0A0B4J2F2 783 aa23.39■■□□□ 1.34
SNX17-201ENST00000233575 STARD3NLO95772 234 aa23.39■■□□□ 1.34
SNX17-201ENST00000233575 SIK1P57059 783 aa23.39■■□□□ 1.34
SNX17-201ENST00000233575 ANKRD13DQ6ZTN6 518 aa23.39■■□□□ 1.34
SNX17-201ENST00000233575 CWF19L2Q2TBE0 894 aaKnown RBP23.38■■□□□ 1.33
SNX17-201ENST00000233575 ARFGEF2Q9Y6D5 1785 aa23.38■■□□□ 1.33
SNX17-201ENST00000233575 ATP6V1AP38606 617 aa23.38■■□□□ 1.33
SNX17-201ENST00000233575 ITPK1Q13572 414 aa23.37■■□□□ 1.33
SNX17-201ENST00000233575 ZNF330Q9Y3S2 320 aaPredicted RBP23.37■■□□□ 1.33
SNX17-201ENST00000233575 RBM6P78332 1123 aaKnown RBP23.37■■□□□ 1.33
SNX17-201ENST00000233575 ZBTB1Q9Y2K1 713 aa23.37■■□□□ 1.33
SNX17-201ENST00000233575 IGKV5-2P06315 115 aa23.36■■□□□ 1.33
SNX17-201ENST00000233575 SMARCC1Q92922 1105 aaPredicted RBP23.35■■□□□ 1.33
SNX17-201ENST00000233575 NUP188Q5SRE5 1749 aa23.35■■□□□ 1.33
SNX17-201ENST00000233575 NBPF7P0C2Y1 421 aaPredicted RBP23.35■■□□□ 1.33
SNX17-201ENST00000233575 CEP85Q6P2H3 762 aa23.35■■□□□ 1.33
SNX17-201ENST00000233575 MYD88Q99836 296 aa23.35■■□□□ 1.33
SNX17-201ENST00000233575 METTL22Q9BUU2 404 aaPredicted RBP23.35■■□□□ 1.33
SNX17-201ENST00000233575 GNAI3P08754 354 aa23.34■■□□□ 1.33
SNX17-201ENST00000233575 KCNQ4P56696 695 aa23.34■■□□□ 1.33
SNX17-201ENST00000233575 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms