RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 DNTTIP2Q5QJE6 756 aaKnown RBP18.63■□□□□ 0.57
VTN-201ENST00000226218 MPNDQ8N594 471 aa18.63■□□□□ 0.57
VTN-201ENST00000226218 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
VTN-201ENST00000226218 TSC1Q92574 1164 aa18.62■□□□□ 0.57
VTN-201ENST00000226218 TSPYL4Q9UJ04 414 aa18.62■□□□□ 0.57
VTN-201ENST00000226218 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
VTN-201ENST00000226218 DMTNQ08495 405 aa18.62■□□□□ 0.57
VTN-201ENST00000226218 ARID3AQ99856 593 aa18.62■□□□□ 0.57
VTN-201ENST00000226218 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
VTN-201ENST00000226218 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 SNX14Q9Y5W7 946 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 SGSM2O43147 1006 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 AP5Z1O43299 807 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 FOXO3O43524 673 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 F13A1P00488 732 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 FLIIQ13045 1269 aa18.61■□□□□ 0.57
VTN-201ENST00000226218 KDRP35968 1356 aa18.6■□□□□ 0.57
VTN-201ENST00000226218 MAP3K19Q56UN5 1328 aa18.6■□□□□ 0.57
VTN-201ENST00000226218 STX6O43752 255 aa18.6■□□□□ 0.57
VTN-201ENST00000226218 SYT1P21579 422 aa18.6■□□□□ 0.57
VTN-201ENST00000226218 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
VTN-201ENST00000226218 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
VTN-201ENST00000226218 LSG1Q9H089 658 aaKnown RBP18.6■□□□□ 0.57
VTN-201ENST00000226218 RUFY3Q7L099 469 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 KIAA1524Q8TCG1 905 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 PI4K2BQ8TCG2 481 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 KCNF1Q9H3M0 494 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 KIF3AQ9Y496 699 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
VTN-201ENST00000226218 AK2P54819 239 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 SSH3Q8TE77 659 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 PRDM10Q9NQV6 1147 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 LRRFIP2Q9Y608 721 aaKnown RBP18.59■□□□□ 0.57
VTN-201ENST00000226218 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
VTN-201ENST00000226218 AGLP35573 1532 aa18.59■□□□□ 0.57
VTN-201ENST00000226218 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.56
VTN-201ENST00000226218 STK31Q9BXU1 1019 aa18.58■□□□□ 0.56
VTN-201ENST00000226218 BCL2L12Q9HB09 334 aa18.58■□□□□ 0.56
VTN-201ENST00000226218 ZBTB7CA1YPR0 619 aa18.57■□□□□ 0.56
VTN-201ENST00000226218 RASEFQ8IZ41 740 aa18.57■□□□□ 0.56
VTN-201ENST00000226218 USP6P35125 1406 aa18.57■□□□□ 0.56
VTN-201ENST00000226218 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
VTN-201ENST00000226218 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
VTN-201ENST00000226218 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
VTN-201ENST00000226218 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.56■□□□□ 0.56
VTN-201ENST00000226218 POLA2Q14181 598 aa18.56■□□□□ 0.56
VTN-201ENST00000226218 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
VTN-201ENST00000226218 RAB11FIP3O75154 756 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 TPM3P06753 285 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 GIMAP6Q6P9H5 292 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
VTN-201ENST00000226218 IL1RAPL2Q9NP60 686 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 ATP6V1DQ9Y5K8 247 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 FIBPO43427 364 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 ATP2B3Q16720 1220 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 ANKRD7Q92527 254 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 MTMR6Q9Y217 621 aa18.55■□□□□ 0.56
VTN-201ENST00000226218 LARGE1O95461 756 aa18.54■□□□□ 0.56
VTN-201ENST00000226218 CTIFO43310 598 aaKnown RBP18.53■□□□□ 0.56
VTN-201ENST00000226218 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
VTN-201ENST00000226218 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
VTN-201ENST00000226218 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
VTN-201ENST00000226218 ACEP12821 1306 aa18.53■□□□□ 0.56
VTN-201ENST00000226218 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
VTN-201ENST00000226218 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
VTN-201ENST00000226218 PPP4R3BQ5MIZ7 849 aa18.52■□□□□ 0.56
VTN-201ENST00000226218 IGSF1Q8N6C5 1336 aa18.52■□□□□ 0.56
VTN-201ENST00000226218 USP42Q9H9J4 1324 aaKnown RBP18.52■□□□□ 0.56
VTN-201ENST00000226218 RIOK3O14730 519 aaKnown RBP18.52■□□□□ 0.55
VTN-201ENST00000226218 MAP4K4O95819 1239 aaPredicted RBP18.52■□□□□ 0.55
VTN-201ENST00000226218 DNM1Q05193 864 aaKnown RBP18.52■□□□□ 0.55
VTN-201ENST00000226218 ST3GAL1Q11201 340 aa18.52■□□□□ 0.55
VTN-201ENST00000226218 RHPN1Q8TCX5 695 aa18.52■□□□□ 0.55
VTN-201ENST00000226218 KCNB2Q92953 911 aa18.52■□□□□ 0.55
VTN-201ENST00000226218 DIAPH3Q9NSV4 1193 aa18.52■□□□□ 0.55
VTN-201ENST00000226218 MAP3K5Q99683 1374 aa18.52■□□□□ 0.55
VTN-201ENST00000226218 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
VTN-201ENST00000226218 GTPBP4Q9BZE4 634 aaKnown RBP18.51■□□□□ 0.55
VTN-201ENST00000226218 FLT4P35916 1363 aa18.5■□□□□ 0.55
VTN-201ENST00000226218 ROBO2Q9HCK4 1378 aa18.5■□□□□ 0.55
VTN-201ENST00000226218 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
VTN-201ENST00000226218 GJB2P29033 226 aa18.5■□□□□ 0.55
VTN-201ENST00000226218 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
VTN-201ENST00000226218 CBX1P83916 185 aa18.5■□□□□ 0.55
VTN-201ENST00000226218 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
VTN-201ENST00000226218 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
VTN-201ENST00000226218 VPS53Q5VIR6 699 aa18.49■□□□□ 0.55
VTN-201ENST00000226218 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
VTN-201ENST00000226218 NWD1Q149M9 1564 aa18.49■□□□□ 0.55
VTN-201ENST00000226218 TM6SF1Q9BZW5 370 aa18.49■□□□□ 0.55
VTN-201ENST00000226218 CPA1P15085 419 aa18.48■□□□□ 0.55
VTN-201ENST00000226218 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
VTN-201ENST00000226218 PDCL2Q8N4E4 241 aa18.48■□□□□ 0.55
VTN-201ENST00000226218 KIF1BPQ96EK5 621 aa18.48■□□□□ 0.55
VTN-201ENST00000226218 SURF6O75683 361 aaKnown RBP18.47■□□□□ 0.55
VTN-201ENST00000226218 CCDC192P0DO97 292 aa18.47■□□□□ 0.55
VTN-201ENST00000226218 CASTP20810 708 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms