RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 DNAJC5GQ8N7S2 189 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 DCAF5Q96JK2 942 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 PALLDQ8WX93 1383 aa10.01□□□□□ -0.81
CCL13-201ENST00000225844 GNAT3A8MTJ3 354 aa10□□□□□ -0.81
CCL13-201ENST00000225844 CALD1Q05682 793 aaKnown RBP10□□□□□ -0.81
CCL13-201ENST00000225844 NFE2L2Q16236 605 aa10□□□□□ -0.81
CCL13-201ENST00000225844 CCDC27Q2M243 656 aa10□□□□□ -0.81
CCL13-201ENST00000225844 SMIM5Q71RC9 77 aa10□□□□□ -0.81
CCL13-201ENST00000225844 C16orf71Q8IYS4 520 aaPredicted RBP10□□□□□ -0.81
CCL13-201ENST00000225844 FAM9BQ8IZU0 186 aa10□□□□□ -0.81
CCL13-201ENST00000225844 TNS4Q8IZW8 715 aa10□□□□□ -0.81
CCL13-201ENST00000225844 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
CCL13-201ENST00000225844 MEGF6O75095 1541 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.99□□□□□ -0.81
CCL13-201ENST00000225844 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 PHKG2P15735 406 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 HTRA3P83110 453 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 MTHFSDQ2M296 383 aaKnown RBP9.99□□□□□ -0.81
CCL13-201ENST00000225844 ZNF530Q6P9A1 599 aaPredicted RBP9.99□□□□□ -0.81
CCL13-201ENST00000225844 AMIGO3Q86WK7 504 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 RTF1Q92541 710 aaKnown RBP9.99□□□□□ -0.81
CCL13-201ENST00000225844 PHF12Q96QT6 1004 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 BABAM1Q9NWV8 329 aa9.99□□□□□ -0.81
CCL13-201ENST00000225844 TMPOP42166 694 aaKnown RBP9.98□□□□□ -0.81
CCL13-201ENST00000225844 ARHGAP27Q6ZUM4 889 aa9.98□□□□□ -0.81
CCL13-201ENST00000225844 PHACTR3Q96KR7 559 aa9.98□□□□□ -0.81
CCL13-201ENST00000225844 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
CCL13-201ENST00000225844 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
CCL13-201ENST00000225844 DOT1LQ8TEK3 1739 aa9.98□□□□□ -0.81
CCL13-201ENST00000225844 PCNTO95613 3336 aa9.97□□□□□ -0.81
CCL13-201ENST00000225844 CYP27B1O15528 508 aa9.97□□□□□ -0.81
CCL13-201ENST00000225844 RIPK4P57078 832 aa9.97□□□□□ -0.81
CCL13-201ENST00000225844 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
CCL13-201ENST00000225844 KLRG1Q96E93 195 aa9.97□□□□□ -0.81
CCL13-201ENST00000225844 LY75O60449 1722 aa9.96□□□□□ -0.81
CCL13-201ENST00000225844 APAF1O14727 1248 aa9.96□□□□□ -0.82
CCL13-201ENST00000225844 MMP10P09238 476 aa9.96□□□□□ -0.82
CCL13-201ENST00000225844 SSFA2P28290 1259 aa9.96□□□□□ -0.82
CCL13-201ENST00000225844 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
CCL13-201ENST00000225844 PKD1L3Q7Z443 1732 aa9.96□□□□□ -0.82
CCL13-201ENST00000225844 A0A0G2JLW4 131 aa9.95□□□□□ -0.82
CCL13-201ENST00000225844 GNPATO15228 680 aa9.95□□□□□ -0.82
CCL13-201ENST00000225844 PRELPP51888 382 aa9.95□□□□□ -0.82
CCL13-201ENST00000225844 WDR63Q8IWG1 891 aa9.95□□□□□ -0.82
CCL13-201ENST00000225844 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
CCL13-201ENST00000225844 SP7Q8TDD2 431 aaPredicted RBP9.95□□□□□ -0.82
CCL13-201ENST00000225844 IL16Q14005 1332 aa9.95□□□□□ -0.82
CCL13-201ENST00000225844 CEMIPQ8WUJ3 1361 aa9.95□□□□□ -0.82
CCL13-201ENST00000225844 RGPD2P0DJD1 1756 aa9.94□□□□□ -0.82
CCL13-201ENST00000225844 RNMTO43148 476 aaKnown RBP9.94□□□□□ -0.82
CCL13-201ENST00000225844 DCAF8Q5TAQ9 597 aa9.94□□□□□ -0.82
CCL13-201ENST00000225844 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
CCL13-201ENST00000225844 JMYQ8N9B5 988 aa9.94□□□□□ -0.82
CCL13-201ENST00000225844 LINC00116Q8NCU8 138 aa9.94□□□□□ -0.82
CCL13-201ENST00000225844 CHMP4AQ9BY43 222 aa9.94□□□□□ -0.82
CCL13-201ENST00000225844 LOC102724428A0A0B4J2F2 783 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 SIK1P57059 783 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 CABP4P57796 275 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 TGFB2P61812 414 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 TEFQ10587 303 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 FSTL1Q12841 308 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 TAF7Q15545 349 aaPredicted RBP9.93□□□□□ -0.82
CCL13-201ENST00000225844 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 PIGBQ92521 554 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 SLC52A2Q9HAB3 445 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 C5P01031 1676 aa9.93□□□□□ -0.82
CCL13-201ENST00000225844 PXDNLA1KZ92 1463 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 KDM2BQ8NHM5 1336 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 DPEP1P16444 411 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 IL17REQ8NFR9 667 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 CCDC87Q9NVE4 849 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
CCL13-201ENST00000225844 C4BP0C0L5 1744 aa9.91□□□□□ -0.82
CCL13-201ENST00000225844 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
CCL13-201ENST00000225844 GNAI1P63096 354 aa9.91□□□□□ -0.82
CCL13-201ENST00000225844 CFAP44Q96MT7 982 aa9.91□□□□□ -0.82
CCL13-201ENST00000225844 CICQ96RK0 1608 aaPredicted RBP9.9□□□□□ -0.82
CCL13-201ENST00000225844 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
CCL13-201ENST00000225844 GABBR2O75899 941 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 ITPK1Q13572 414 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 TRAPPC3LQ5T215 181 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 NLGN1Q8N2Q7 840 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 LGR6Q9HBX8 967 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 IFT57Q9NWB7 429 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
CCL13-201ENST00000225844 PARP3Q9Y6F1 533 aa9.9□□□□□ -0.82
CCL13-201ENST00000225844 CHL1O00533 1208 aa9.89□□□□□ -0.83
CCL13-201ENST00000225844 HSPA1AP0DMV8 641 aaKnown RBP9.89□□□□□ -0.83
CCL13-201ENST00000225844 HSPA1BP0DMV9 641 aaKnown RBP9.89□□□□□ -0.83
CCL13-201ENST00000225844 GOLGA2Q08379 1002 aa9.89□□□□□ -0.83
CCL13-201ENST00000225844 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms