RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ZCRB1Q8TBF4 217 aaKnown RBP21.83■■□□□ 1.08
GCDH-201ENST00000222214 SSH3Q8TE77 659 aa21.83■■□□□ 1.08
GCDH-201ENST00000222214 LRRCC1Q9C099 1032 aa21.83■■□□□ 1.08
GCDH-201ENST00000222214 C5P01031 1676 aa21.82■■□□□ 1.08
GCDH-201ENST00000222214 CABP4P57796 275 aa21.82■■□□□ 1.08
GCDH-201ENST00000222214 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
GCDH-201ENST00000222214 PNMA6EA0A0J9YXQ4 647 aa21.81■■□□□ 1.08
GCDH-201ENST00000222214 SNRPA1P09661 255 aaKnown RBP21.81■■□□□ 1.08
GCDH-201ENST00000222214 GSPT1P15170 499 aaKnown RBP21.81■■□□□ 1.08
GCDH-201ENST00000222214 TBC1D9Q6ZT07 1266 aa21.81■■□□□ 1.08
GCDH-201ENST00000222214 ANXA1P04083 346 aa21.81■■□□□ 1.08
GCDH-201ENST00000222214 IL2RBP14784 551 aa21.81■■□□□ 1.08
GCDH-201ENST00000222214 SLC39A6Q13433 755 aa21.81■■□□□ 1.08
GCDH-201ENST00000222214 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
GCDH-201ENST00000222214 RAB11FIP3O75154 756 aa21.8■■□□□ 1.08
GCDH-201ENST00000222214 C16orf71Q8IYS4 520 aaPredicted RBP21.8■■□□□ 1.08
GCDH-201ENST00000222214 ERVV-2B6SEH9 535 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 SMARCA5O60264 1052 aaPredicted RBP21.79■■□□□ 1.08
GCDH-201ENST00000222214 SLC4A3P48751 1232 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 EVA1CP58658 441 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 POLA2Q14181 598 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 PDIA6Q15084 440 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 NKX1-1Q15270 411 aaPredicted RBP21.79■■□□□ 1.08
GCDH-201ENST00000222214 PROSER3Q2NL68 480 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 CASC1Q6TDU7 716 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 LINS1Q8NG48 757 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
GCDH-201ENST00000222214 EXOC6BQ9Y2D4 811 aa21.79■■□□□ 1.08
GCDH-201ENST00000222214 APBB1O00213 710 aa21.78■■□□□ 1.08
GCDH-201ENST00000222214 USP35Q9P2H5 1018 aa21.78■■□□□ 1.08
GCDH-201ENST00000222214 LAMB4A4D0S4 1761 aa21.78■■□□□ 1.08
GCDH-201ENST00000222214 HSP90AB4PQ58FF6 505 aa21.78■■□□□ 1.08
GCDH-201ENST00000222214 NBPF7P0C2Y1 421 aaPredicted RBP21.77■■□□□ 1.08
GCDH-201ENST00000222214 MTX1Q13505 466 aa21.77■■□□□ 1.08
GCDH-201ENST00000222214 PPP1R42Q7Z4L9 355 aa21.77■■□□□ 1.08
GCDH-201ENST00000222214 AHDC1Q5TGY3 1603 aaPredicted RBP21.77■■□□□ 1.07
GCDH-201ENST00000222214 PDE1AP54750 535 aa21.76■■□□□ 1.07
GCDH-201ENST00000222214 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
GCDH-201ENST00000222214 OTUD7AQ8TE49 926 aaPredicted RBP21.76■■□□□ 1.07
GCDH-201ENST00000222214 C9orf78Q9NZ63 289 aaPredicted RBP21.76■■□□□ 1.07
GCDH-201ENST00000222214 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
GCDH-201ENST00000222214 SALL3Q9BXA9 1300 aa21.75■■□□□ 1.07
GCDH-201ENST00000222214 UTYO14607 1347 aa21.75■■□□□ 1.07
GCDH-201ENST00000222214 AOX1Q06278 1338 aa21.75■■□□□ 1.07
GCDH-201ENST00000222214 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
GCDH-201ENST00000222214 COL22A1Q8NFW1 1626 aaPredicted RBP21.74■■□□□ 1.07
GCDH-201ENST00000222214 COL14A1Q05707 1796 aaKnown RBP21.74■■□□□ 1.07
GCDH-201ENST00000222214 SRGAP3O43295 1099 aa21.74■■□□□ 1.07
GCDH-201ENST00000222214 SDSP20132 328 aa21.74■■□□□ 1.07
GCDH-201ENST00000222214 NEXNQ0ZGT2 675 aa21.74■■□□□ 1.07
GCDH-201ENST00000222214 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 SHANK3Q9BYB0 1731 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 NBR1Q14596 966 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 RIC3Q7Z5B4 369 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 UBR2Q8IWV8 1755 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 STRN4Q9NRL3 753 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 STAP2Q9UGK3 403 aa21.73■■□□□ 1.07
GCDH-201ENST00000222214 PAPPAQ13219 1627 aa21.72■■□□□ 1.07
GCDH-201ENST00000222214 MX1P20591 662 aa21.72■■□□□ 1.07
GCDH-201ENST00000222214 KIF1BPQ96EK5 621 aa21.72■■□□□ 1.07
GCDH-201ENST00000222214 GLI3P10071 1580 aa21.71■■□□□ 1.07
GCDH-201ENST00000222214 GRM8O00222 908 aa21.71■■□□□ 1.07
GCDH-201ENST00000222214 SURF6O75683 361 aaKnown RBP21.71■■□□□ 1.07
GCDH-201ENST00000222214 AIMP1Q12904 312 aaKnown RBP21.7■■□□□ 1.07
GCDH-201ENST00000222214 USP16Q9Y5T5 823 aa21.7■■□□□ 1.07
GCDH-201ENST00000222214 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
GCDH-201ENST00000222214 SNX21Q969T3 373 aa21.7■■□□□ 1.06
GCDH-201ENST00000222214 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
GCDH-201ENST00000222214 MYL6BP14649 208 aa21.69■■□□□ 1.06
GCDH-201ENST00000222214 COPS6Q7L5N1 327 aa21.69■■□□□ 1.06
GCDH-201ENST00000222214 LRP10Q7Z4F1 713 aa21.69■■□□□ 1.06
GCDH-201ENST00000222214 METTL22Q9BUU2 404 aaPredicted RBP21.69■■□□□ 1.06
GCDH-201ENST00000222214 BCL11AQ9H165 835 aa21.69■■□□□ 1.06
GCDH-201ENST00000222214 CWF19L2Q2TBE0 894 aaKnown RBP21.68■■□□□ 1.06
GCDH-201ENST00000222214 ANKRD13DQ6ZTN6 518 aa21.68■■□□□ 1.06
GCDH-201ENST00000222214 RHPN1Q8TCX5 695 aa21.68■■□□□ 1.06
GCDH-201ENST00000222214 ERC1Q8IUD2 1116 aa21.68■■□□□ 1.06
GCDH-201ENST00000222214 HSCBQ8IWL3 235 aa21.68■■□□□ 1.06
GCDH-201ENST00000222214 REC8O95072 547 aa21.67■■□□□ 1.06
GCDH-201ENST00000222214 BTG4Q9NY30 223 aa21.67■■□□□ 1.06
GCDH-201ENST00000222214 TNS2Q63HR2 1409 aa21.67■■□□□ 1.06
GCDH-201ENST00000222214 LTBP4Q8N2S1 1624 aa21.66■■□□□ 1.06
GCDH-201ENST00000222214 KCPQ6ZWJ8 1503 aa21.66■■□□□ 1.06
GCDH-201ENST00000222214 DDX54Q8TDD1 881 aaKnown RBP21.66■■□□□ 1.06
GCDH-201ENST00000222214 NEURL1BA8MQ27 555 aa21.65■■□□□ 1.06
GCDH-201ENST00000222214 IGKV5-2P06315 115 aa21.65■■□□□ 1.06
GCDH-201ENST00000222214 PLCH1Q4KWH8 1693 aa21.65■■□□□ 1.06
GCDH-201ENST00000222214 ARFGEF2Q9Y6D5 1785 aa21.64■■□□□ 1.06
GCDH-201ENST00000222214 COL15A1P39059 1388 aa21.64■■□□□ 1.05
GCDH-201ENST00000222214 GCKRQ14397 625 aa21.64■■□□□ 1.05
GCDH-201ENST00000222214 PLBD2Q8NHP8 589 aa21.64■■□□□ 1.05
GCDH-201ENST00000222214 ERC2O15083 957 aa21.63■■□□□ 1.05
GCDH-201ENST00000222214 USP26Q9BXU7 913 aa21.63■■□□□ 1.05
GCDH-201ENST00000222214 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
GCDH-201ENST00000222214 OS9Q13438 667 aaPredicted RBP21.62■■□□□ 1.05
GCDH-201ENST00000222214 SUCLG2Q96I99 432 aa21.62■■□□□ 1.05
GCDH-201ENST00000222214 KIF2CQ99661 725 aa21.62■■□□□ 1.05
GCDH-201ENST00000222214 MYD88Q99836 296 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms