RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 DDB1Q16531 1140 aa19.12■□□□□ 0.65
PAF1-201ENST00000221265 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
PAF1-201ENST00000221265 VPS72Q15906 364 aa19.12■□□□□ 0.65
PAF1-201ENST00000221265 FAM98CQ17RN3 349 aaKnown RBP19.12■□□□□ 0.65
PAF1-201ENST00000221265 FMNL2Q96PY5 1086 aa19.12■□□□□ 0.65
PAF1-201ENST00000221265 CDCA7Q9BWT1 371 aaPredicted RBP19.12■□□□□ 0.65
PAF1-201ENST00000221265 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
PAF1-201ENST00000221265 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
PAF1-201ENST00000221265 KCPQ6ZWJ8 1503 aa19.11■□□□□ 0.65
PAF1-201ENST00000221265 BARGINQ6ZT62 677 aa19.11■□□□□ 0.65
PAF1-201ENST00000221265 PIGBQ92521 554 aa19.11■□□□□ 0.65
PAF1-201ENST00000221265 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
PAF1-201ENST00000221265 USP21Q9UK80 565 aa19.11■□□□□ 0.65
PAF1-201ENST00000221265 DOT1LQ8TEK3 1739 aa19.11■□□□□ 0.65
PAF1-201ENST00000221265 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
PAF1-201ENST00000221265 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.1■□□□□ 0.65
PAF1-201ENST00000221265 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
PAF1-201ENST00000221265 PDIA6Q15084 440 aa19.1■□□□□ 0.65
PAF1-201ENST00000221265 MEX3CQ5U5Q3 659 aaKnown RBP19.1■□□□□ 0.65
PAF1-201ENST00000221265 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
PAF1-201ENST00000221265 MARCH10Q8NA82 808 aaPredicted RBP19.09■□□□□ 0.65
PAF1-201ENST00000221265 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
PAF1-201ENST00000221265 PIP4K2AP48426 406 aaPredicted RBP19.09■□□□□ 0.65
PAF1-201ENST00000221265 RGS3P49796 1198 aa19.09■□□□□ 0.65
PAF1-201ENST00000221265 C8orf34Q49A92 452 aa19.09■□□□□ 0.65
PAF1-201ENST00000221265 ASAP1Q9ULH1 1129 aa19.09■□□□□ 0.65
PAF1-201ENST00000221265 N4BP2Q86UW6 1770 aaPredicted RBP19.08■□□□□ 0.65
PAF1-201ENST00000221265 FAM161AQ3B820 660 aa19.08■□□□□ 0.64
PAF1-201ENST00000221265 CHMP4AQ9BY43 222 aa19.07■□□□□ 0.64
PAF1-201ENST00000221265 SYTL4Q96C24 671 aaPredicted RBP19.07■□□□□ 0.64
PAF1-201ENST00000221265 MEIS3Q99687 375 aa19.07■□□□□ 0.64
PAF1-201ENST00000221265 BCL9O00512 1426 aa19.06■□□□□ 0.64
PAF1-201ENST00000221265 DDX21Q9NR30 783 aaKnown RBP eCLIP19.06■□□□□ 0.64
PAF1-201ENST00000221265 AFF2P51816 1311 aa19.06■□□□□ 0.64
PAF1-201ENST00000221265 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
PAF1-201ENST00000221265 MYL6BP14649 208 aa19.05■□□□□ 0.64
PAF1-201ENST00000221265 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
PAF1-201ENST00000221265 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
PAF1-201ENST00000221265 ADCY9O60503 1353 aa19.05■□□□□ 0.64
PAF1-201ENST00000221265 CCT4P50991 539 aaKnown RBP19.05■□□□□ 0.64
PAF1-201ENST00000221265 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
PAF1-201ENST00000221265 AIMP1Q12904 312 aaKnown RBP19.04■□□□□ 0.64
PAF1-201ENST00000221265 ACSBG1Q96GR2 724 aa19.04■□□□□ 0.64
PAF1-201ENST00000221265 RWDD1Q9H446 243 aaPredicted RBP19.04■□□□□ 0.64
PAF1-201ENST00000221265 HYPKQ9NX55 129 aa19.04■□□□□ 0.64
PAF1-201ENST00000221265 NBR1Q14596 966 aa19.03■□□□□ 0.64
PAF1-201ENST00000221265 LRP10Q7Z4F1 713 aa19.03■□□□□ 0.64
PAF1-201ENST00000221265 SIRT2Q8IXJ6 389 aa19.03■□□□□ 0.64
PAF1-201ENST00000221265 CHMP4BQ9H444 224 aaKnown RBP19.02■□□□□ 0.64
PAF1-201ENST00000221265 PXDNLA1KZ92 1463 aa19.02■□□□□ 0.64
PAF1-201ENST00000221265 EP400Q96L91 3159 aa19.02■□□□□ 0.64
PAF1-201ENST00000221265 A0A0G2JS52 829 aa19.02■□□□□ 0.63
PAF1-201ENST00000221265 HDAC1Q13547 482 aaPredicted RBP19.02■□□□□ 0.63
PAF1-201ENST00000221265 DNAAF4Q8WXU2 420 aa19.02■□□□□ 0.63
PAF1-201ENST00000221265 MAP3K2Q9Y2U5 619 aa19.01■□□□□ 0.63
PAF1-201ENST00000221265 THSD7AQ9UPZ6 1657 aa19.01■□□□□ 0.63
PAF1-201ENST00000221265 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
PAF1-201ENST00000221265 NBPF14Q5TI25 921 aa19.01■□□□□ 0.63
PAF1-201ENST00000221265 NBPF10Q6P3W6 841 aaKnown RBP19.01■□□□□ 0.63
PAF1-201ENST00000221265 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
PAF1-201ENST00000221265 XAGE3Q8WTP9 111 aa19.01■□□□□ 0.63
PAF1-201ENST00000221265 ATP10DQ9P241 1426 aa19■□□□□ 0.63
PAF1-201ENST00000221265 A1BGP04217 495 aa19■□□□□ 0.63
PAF1-201ENST00000221265 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
PAF1-201ENST00000221265 BEND3Q5T5X7 828 aa18.99■□□□□ 0.63
PAF1-201ENST00000221265 KSR2Q6VAB6 950 aa18.99■□□□□ 0.63
PAF1-201ENST00000221265 COPS6Q7L5N1 327 aa18.99■□□□□ 0.63
PAF1-201ENST00000221265 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
PAF1-201ENST00000221265 GJD4Q96KN9 370 aaPredicted RBP18.99■□□□□ 0.63
PAF1-201ENST00000221265 SLC4A9Q96Q91 983 aa18.99■□□□□ 0.63
PAF1-201ENST00000221265 KCNQ2O43526 872 aa18.98■□□□□ 0.63
PAF1-201ENST00000221265 DNAJC10Q8IXB1 793 aa18.98■□□□□ 0.63
PAF1-201ENST00000221265 USP44Q9H0E7 712 aa18.98■□□□□ 0.63
PAF1-201ENST00000221265 SRCIN1Q9C0H9 1055 aa18.97■□□□□ 0.63
PAF1-201ENST00000221265 ATRNO75882 1429 aa18.97■□□□□ 0.63
PAF1-201ENST00000221265 FAM182BQ5T319 152 aa18.97■□□□□ 0.63
PAF1-201ENST00000221265 PDZRN3Q9UPQ7 1066 aa18.97■□□□□ 0.63
PAF1-201ENST00000221265 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
PAF1-201ENST00000221265 CEP85Q6P2H3 762 aa18.96■□□□□ 0.63
PAF1-201ENST00000221265 CWF19L2Q2TBE0 894 aaKnown RBP18.95■□□□□ 0.62
PAF1-201ENST00000221265 SMC5Q8IY18 1101 aa18.95■□□□□ 0.62
PAF1-201ENST00000221265 TJP1Q07157 1748 aa18.95■□□□□ 0.62
PAF1-201ENST00000221265 DDX58O95786 925 aaKnown RBP18.94■□□□□ 0.62
PAF1-201ENST00000221265 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
PAF1-201ENST00000221265 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
PAF1-201ENST00000221265 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
PAF1-201ENST00000221265 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
PAF1-201ENST00000221265 PTF1AQ7RTS3 328 aa18.94■□□□□ 0.62
PAF1-201ENST00000221265 ERBB4Q15303 1308 aa18.93■□□□□ 0.62
PAF1-201ENST00000221265 NBPF7P0C2Y1 421 aaPredicted RBP18.93■□□□□ 0.62
PAF1-201ENST00000221265 TTLL7Q6ZT98 887 aa18.93■□□□□ 0.62
PAF1-201ENST00000221265 QTRT2Q9H974 415 aaKnown RBP18.93■□□□□ 0.62
PAF1-201ENST00000221265 GNAI2P04899 355 aa18.93■□□□□ 0.62
PAF1-201ENST00000221265 GNAI3P08754 354 aa18.93■□□□□ 0.62
PAF1-201ENST00000221265 ANKRD13DQ6ZTN6 518 aa18.93■□□□□ 0.62
PAF1-201ENST00000221265 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
PAF1-201ENST00000221265 IGKV5-2P06315 115 aa18.92■□□□□ 0.62
PAF1-201ENST00000221265 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
PAF1-201ENST00000221265 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
PAF1-201ENST00000221265 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms