RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 HMGN5P82970 282 aaKnown RBP12.28□□□□□ -0.44
TRPS1-201ENST00000220888 PDE4BQ07343 736 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 BEGAINQ9BUH8 593 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 CACNA2D4Q7Z3S7 1137 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 HOMER2Q9NSB8 354 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 ZNF213O14771 459 aa12.28□□□□□ -0.44
TRPS1-201ENST00000220888 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
TRPS1-201ENST00000220888 CDCA7LQ96GN5 454 aa12.27□□□□□ -0.44
TRPS1-201ENST00000220888 UPF3BQ9BZI7 483 aaKnown RBP12.27□□□□□ -0.44
TRPS1-201ENST00000220888 BOLA2Q9H3K6 86 aa12.27□□□□□ -0.44
TRPS1-201ENST00000220888 B4DLN1 442 aa12.27□□□□□ -0.44
TRPS1-201ENST00000220888 ERLIN1O75477 346 aa12.27□□□□□ -0.44
TRPS1-201ENST00000220888 MRPL12P52815 198 aaKnown RBP12.27□□□□□ -0.44
TRPS1-201ENST00000220888 TRAF1Q13077 416 aa12.27□□□□□ -0.44
TRPS1-201ENST00000220888 LDHAL6AQ6ZMR3 332 aa12.27□□□□□ -0.44
TRPS1-201ENST00000220888 CTNNA2P26232 953 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 KIF5BP33176 963 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 HOOK3Q86VS8 718 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 SPA17Q15506 151 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 CKAP2LQ8IYA6 745 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 SETDB2Q96T68 719 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
TRPS1-201ENST00000220888 MRE11P49959 708 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
TRPS1-201ENST00000220888 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
TRPS1-201ENST00000220888 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
TRPS1-201ENST00000220888 FERMT1Q9BQL6 677 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
TRPS1-201ENST00000220888 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
TRPS1-201ENST00000220888 MACROD2A1Z1Q3 448 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 CHD1LQ86WJ1 897 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 MVPQ14764 893 aaKnown RBP12.26□□□□□ -0.45
TRPS1-201ENST00000220888 LRSAM1Q6UWE0 723 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 PSMD1Q99460 953 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 UTP14AQ9BVJ6 771 aaKnown RBP12.26□□□□□ -0.45
TRPS1-201ENST00000220888 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 DBF4Q9UBU7 674 aaPredicted RBP12.26□□□□□ -0.45
TRPS1-201ENST00000220888 EXOC6BQ9Y2D4 811 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
TRPS1-201ENST00000220888 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 PARP3Q9Y6F1 533 aa12.26□□□□□ -0.45
TRPS1-201ENST00000220888 CCDC152Q4G0S7 254 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 TTC16Q8NEE8 873 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 CTNNBL1Q8WYA6 563 aaPredicted RBP12.25□□□□□ -0.45
TRPS1-201ENST00000220888 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 PPP4R3BQ5MIZ7 849 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 BICD1Q96G01 975 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 ARHGAP29Q52LW3 1261 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 LEKR1Q6ZMV7 388 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 SYCP3Q8IZU3 236 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 DNAAF4Q8WXU2 420 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 CWC25Q9NXE8 425 aaPredicted RBP12.25□□□□□ -0.45
TRPS1-201ENST00000220888 GOLGA8AA7E2F4 631 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 GOLGA8BA8MQT2 603 aa12.25□□□□□ -0.45
TRPS1-201ENST00000220888 SSRP1Q08945 709 aaKnown RBP12.25□□□□□ -0.45
TRPS1-201ENST00000220888 STAMBPO95630 424 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 HMGB1P09429 215 aaKnown RBP12.24□□□□□ -0.45
TRPS1-201ENST00000220888 CALML4Q96GE6 196 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 TRAK2O60296 914 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
TRPS1-201ENST00000220888 KIAA0754O94854 1291 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 DAPK1P53355 1430 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 KIAA1107Q9UPP5 1409 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 TMPOP42166 694 aaKnown RBP12.24□□□□□ -0.45
TRPS1-201ENST00000220888 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 C8orf76Q96K31 380 aa12.24□□□□□ -0.45
TRPS1-201ENST00000220888 PUF60Q9UHX1 559 aaKnown RBP12.24□□□□□ -0.45
TRPS1-201ENST00000220888 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
TRPS1-201ENST00000220888 RFX1P22670 979 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 K7ELQ4 463 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-201ENST00000220888 USP8P40818 1118 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 CFAP100Q494V2 611 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
TRPS1-201ENST00000220888 NME9Q86XW9 330 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 NLRP3Q96P20 1036 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 WWC3Q9ULE0 1092 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 MX1P20591 662 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 NCBP1Q09161 790 aaKnown RBP12.23□□□□□ -0.45
TRPS1-201ENST00000220888 DDB1Q16531 1140 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 ZGPATQ8N5A5 531 aaKnown RBP12.23□□□□□ -0.45
TRPS1-201ENST00000220888 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 AMPD3Q01432 767 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 TCERG1LQ5VWI1 586 aa12.23□□□□□ -0.45
TRPS1-201ENST00000220888 KLHL10Q6JEL2 608 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms