RNA–Protein interactions for RNA: ENST00000216489.7

ALKBH1-201, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH1, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-201ENST00000216489 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
ALKBH1-201ENST00000216489 PARP4Q9UKK3 1724 aaKnown RBP16.85■□□□□ 0.29
ALKBH1-201ENST00000216489 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
ALKBH1-201ENST00000216489 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
ALKBH1-201ENST00000216489 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
ALKBH1-201ENST00000216489 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
ALKBH1-201ENST00000216489 PDIA6Q15084 440 aa16.84■□□□□ 0.29
ALKBH1-201ENST00000216489 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 IBTKQ9P2D0 1353 aaPredicted RBP16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 MYL6BP14649 208 aa16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 PPP1R42Q7Z4L9 355 aa16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 HYPKQ9NX55 129 aa16.83■□□□□ 0.28
ALKBH1-201ENST00000216489 CABP4P57796 275 aa16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 SDSP20132 328 aa16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 PIP4K2AP48426 406 aaPredicted RBP16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
ALKBH1-201ENST00000216489 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
ALKBH1-201ENST00000216489 RTL5Q5HYW3 569 aaPredicted RBP16.81■□□□□ 0.28
ALKBH1-201ENST00000216489 HSP90AB1P08238 724 aaKnown RBP16.81■□□□□ 0.28
ALKBH1-201ENST00000216489 RBM25P49756 843 aaKnown RBP16.81■□□□□ 0.28
ALKBH1-201ENST00000216489 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
ALKBH1-201ENST00000216489 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
ALKBH1-201ENST00000216489 PDE1AP54750 535 aa16.8■□□□□ 0.28
ALKBH1-201ENST00000216489 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
ALKBH1-201ENST00000216489 SRGAP3O43295 1099 aa16.8■□□□□ 0.28
ALKBH1-201ENST00000216489 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
ALKBH1-201ENST00000216489 PCDH11XQ9BZA7 1347 aa16.8■□□□□ 0.28
ALKBH1-201ENST00000216489 PCDH11YQ9BZA8 1340 aa16.8■□□□□ 0.28
ALKBH1-201ENST00000216489 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
ALKBH1-201ENST00000216489 EVA1CP58658 441 aa16.79■□□□□ 0.28
ALKBH1-201ENST00000216489 POLA2Q14181 598 aa16.79■□□□□ 0.28
ALKBH1-201ENST00000216489 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
ALKBH1-201ENST00000216489 GLI3P10071 1580 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 SURF6O75683 361 aaKnown RBP16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 CARD10Q9BWT7 1032 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 C9orf78Q9NZ63 289 aaPredicted RBP16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 IL2RBP14784 551 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
ALKBH1-201ENST00000216489 ALDH1L1O75891 902 aa16.77■□□□□ 0.28
ALKBH1-201ENST00000216489 MX1P20591 662 aa16.77■□□□□ 0.27
ALKBH1-201ENST00000216489 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.27
ALKBH1-201ENST00000216489 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.27
ALKBH1-201ENST00000216489 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
ALKBH1-201ENST00000216489 TUBGCP6Q96RT7 1819 aa16.76■□□□□ 0.27
ALKBH1-201ENST00000216489 NFKBIBQ15653 356 aa16.76■□□□□ 0.27
ALKBH1-201ENST00000216489 KIF2CQ99661 725 aa16.76■□□□□ 0.27
ALKBH1-201ENST00000216489 LINS1Q8NG48 757 aa16.75■□□□□ 0.27
ALKBH1-201ENST00000216489 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
ALKBH1-201ENST00000216489 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
ALKBH1-201ENST00000216489 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
ALKBH1-201ENST00000216489 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
ALKBH1-201ENST00000216489 LRP10Q7Z4F1 713 aa16.74■□□□□ 0.27
ALKBH1-201ENST00000216489 SUCLG2Q96I99 432 aa16.74■□□□□ 0.27
ALKBH1-201ENST00000216489 BTG4Q9NY30 223 aa16.74■□□□□ 0.27
ALKBH1-201ENST00000216489 GRM8O00222 908 aa16.73■□□□□ 0.27
ALKBH1-201ENST00000216489 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
ALKBH1-201ENST00000216489 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
ALKBH1-201ENST00000216489 MYD88Q99836 296 aa16.73■□□□□ 0.27
ALKBH1-201ENST00000216489 RAB11FIP3O75154 756 aa16.73■□□□□ 0.27
ALKBH1-201ENST00000216489 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
ALKBH1-201ENST00000216489 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
ALKBH1-201ENST00000216489 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
ALKBH1-201ENST00000216489 TOGARAM1Q9Y4F4 1720 aa16.72■□□□□ 0.27
ALKBH1-201ENST00000216489 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
ALKBH1-201ENST00000216489 PA2G4Q9UQ80 394 aaKnown RBP16.72■□□□□ 0.27
ALKBH1-201ENST00000216489 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
ALKBH1-201ENST00000216489 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
ALKBH1-201ENST00000216489 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
ALKBH1-201ENST00000216489 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
ALKBH1-201ENST00000216489 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 MTX1Q13505 466 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 RILPL2Q969X0 211 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 KIF1BPQ96EK5 621 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 BICC1Q9H694 974 aaKnown RBP16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 STAP2Q9UGK3 403 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 PAPPAQ13219 1627 aa16.71■□□□□ 0.26
ALKBH1-201ENST00000216489 ARFGEF2Q9Y6D5 1785 aa16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 METTL22Q9BUU2 404 aaPredicted RBP16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 CD2BP2O95400 341 aaKnown RBP16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
ALKBH1-201ENST00000216489 USP26Q9BXU7 913 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms