RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 FCHSD2O94868 740 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 CPLX1O14810 134 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 TNNT1P13805 278 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 HS1BP3Q53T59 392 aa13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 ZGPATQ8N5A5 531 aaKnown RBP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
DNMT3B-201ENST00000201963 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 PSMA5P28066 241 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 IL2RBP14784 551 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 CWC27Q6UX04 472 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 PDILTQ8N807 584 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 NOL7Q9UMY1 257 aaKnown RBP13.66□□□□□ -0.22
DNMT3B-201ENST00000201963 RXRBP28702 533 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 CKAP2LQ8IYA6 745 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
DNMT3B-201ENST00000201963 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 PTPN14Q15678 1187 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 CWC15Q9P013 229 aaKnown RBP13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 SKIDA1Q1XH10 827 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 SYNE3Q6ZMZ3 975 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 TET3O43151 1660 aa13.64□□□□□ -0.23
DNMT3B-201ENST00000201963 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 CCT4P50991 539 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 AFF2P51816 1311 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 ARHGEF10O15013 1369 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 SDSP20132 328 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 TPM1P09493 284 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
DNMT3B-201ENST00000201963 ZMYM4Q5VZL5 1548 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 MX1P20591 662 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 HOXC9P31274 260 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 NEXNQ0ZGT2 675 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 CHMP4CQ96CF2 233 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 FER1L4A9Z1Z3 1794 aa13.62□□□□□ -0.23
DNMT3B-201ENST00000201963 ME1P48163 572 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 SMAP1Q8IYB5 467 aaPredicted RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 UBXN4Q92575 508 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 EYA1Q99502 592 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 ZBTB40Q9NUA8 1239 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 TSC1Q92574 1164 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 CEP170BQ9Y4F5 1589 aaPredicted RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 F6X3S4 739 aa13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 SETQ01105 290 aaPredicted RBP13.61□□□□□ -0.23
DNMT3B-201ENST00000201963 PPRC1Q5VV67 1664 aaKnown RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 PIK3R4Q99570 1358 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 BLOC1S2Q6QNY1 142 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms