RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 ERVV-2B6SEH9 535 aa23.19■■□□□ 1.3
CTSA-201ENST00000191018 TTC5Q8N0Z6 440 aa23.19■■□□□ 1.3
CTSA-201ENST00000191018 FMNL2Q96PY5 1086 aa23.18■■□□□ 1.3
CTSA-201ENST00000191018 TOGARAM1Q9Y4F4 1720 aa23.18■■□□□ 1.3
CTSA-201ENST00000191018 SNRPA1P09661 255 aaKnown RBP23.17■■□□□ 1.3
CTSA-201ENST00000191018 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
CTSA-201ENST00000191018 DISP2A7MBM2 1401 aa23.17■■□□□ 1.3
CTSA-201ENST00000191018 UBTFL1P0CB47 393 aaPredicted RBP23.17■■□□□ 1.3
CTSA-201ENST00000191018 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
CTSA-201ENST00000191018 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
CTSA-201ENST00000191018 LRRFIP2Q9Y608 721 aaKnown RBP23.16■■□□□ 1.3
CTSA-201ENST00000191018 WNK3Q9BYP7 1800 aa23.16■■□□□ 1.3
CTSA-201ENST00000191018 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
CTSA-201ENST00000191018 MAP3K2Q9Y2U5 619 aa23.15■■□□□ 1.3
CTSA-201ENST00000191018 USP16Q9Y5T5 823 aa23.14■■□□□ 1.29
CTSA-201ENST00000191018 KCPQ6ZWJ8 1503 aa23.14■■□□□ 1.29
CTSA-201ENST00000191018 PNMA6EA0A0J9YXQ4 647 aa23.13■■□□□ 1.29
CTSA-201ENST00000191018 LRP10Q7Z4F1 713 aa23.13■■□□□ 1.29
CTSA-201ENST00000191018 DDX54Q8TDD1 881 aaKnown RBP23.13■■□□□ 1.29
CTSA-201ENST00000191018 DDRGK1Q96HY6 314 aa23.13■■□□□ 1.29
CTSA-201ENST00000191018 ALDH1L1O75891 902 aa23.13■■□□□ 1.29
CTSA-201ENST00000191018 PLEKHM2Q8IWE5 1019 aa23.13■■□□□ 1.29
CTSA-201ENST00000191018 NRAPQ86VF7 1730 aa23.13■■□□□ 1.29
CTSA-201ENST00000191018 DDX58O95786 925 aaKnown RBP23.12■■□□□ 1.29
CTSA-201ENST00000191018 TNS2Q63HR2 1409 aa23.12■■□□□ 1.29
CTSA-201ENST00000191018 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
CTSA-201ENST00000191018 ZBTB47Q9UFB7 747 aaPredicted RBP23.12■■□□□ 1.29
CTSA-201ENST00000191018 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
CTSA-201ENST00000191018 NBPF7P0C2Y1 421 aaPredicted RBP23.11■■□□□ 1.29
CTSA-201ENST00000191018 SSH3Q8TE77 659 aa23.1■■□□□ 1.29
CTSA-201ENST00000191018 TOM1O60784 492 aa23.09■■□□□ 1.29
CTSA-201ENST00000191018 LINS1Q8NG48 757 aa23.09■■□□□ 1.29
CTSA-201ENST00000191018 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
CTSA-201ENST00000191018 ITGB4P16144 1822 aa23.08■■□□□ 1.29
CTSA-201ENST00000191018 SMARCA5O60264 1052 aaPredicted RBP23.08■■□□□ 1.29
CTSA-201ENST00000191018 MYL6BP14649 208 aa23.08■■□□□ 1.29
CTSA-201ENST00000191018 POLA2Q14181 598 aa23.08■■□□□ 1.29
CTSA-201ENST00000191018 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
CTSA-201ENST00000191018 ERBB4Q15303 1308 aa23.08■■□□□ 1.29
CTSA-201ENST00000191018 LRP6O75581 1613 aa23.08■■□□□ 1.28
CTSA-201ENST00000191018 AIMP1Q12904 312 aaKnown RBP23.07■■□□□ 1.28
CTSA-201ENST00000191018 XAGE3Q8WTP9 111 aa23.07■■□□□ 1.28
CTSA-201ENST00000191018 TBC1D32Q96NH3 1257 aa23.07■■□□□ 1.28
CTSA-201ENST00000191018 COPS6Q7L5N1 327 aa23.07■■□□□ 1.28
CTSA-201ENST00000191018 EXOC6BQ9Y2D4 811 aa23.07■■□□□ 1.28
CTSA-201ENST00000191018 UTYO14607 1347 aa23.07■■□□□ 1.28
CTSA-201ENST00000191018 ARFGEF2Q9Y6D5 1785 aa23.06■■□□□ 1.28
CTSA-201ENST00000191018 GSPT1P15170 499 aaKnown RBP23.06■■□□□ 1.28
CTSA-201ENST00000191018 CWF19L2Q2TBE0 894 aaKnown RBP23.05■■□□□ 1.28
CTSA-201ENST00000191018 PPP1R42Q7Z4L9 355 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 RIC3Q7Z5B4 369 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 OTUD7AQ8TE49 926 aaPredicted RBP23.05■■□□□ 1.28
CTSA-201ENST00000191018 NWD2Q9ULI1 1742 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 APBB1O00213 710 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 MTX1Q13505 466 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 TTC22Q5TAA0 569 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
CTSA-201ENST00000191018 OSBPL3Q9H4L5 887 aa23.04■■□□□ 1.28
CTSA-201ENST00000191018 IGKV5-2P06315 115 aa23.03■■□□□ 1.28
CTSA-201ENST00000191018 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
CTSA-201ENST00000191018 LRRCC1Q9C099 1032 aa23.03■■□□□ 1.28
CTSA-201ENST00000191018 HDAC5Q9UQL6 1122 aa23.03■■□□□ 1.28
CTSA-201ENST00000191018 SALL3Q9BXA9 1300 aa23.03■■□□□ 1.28
CTSA-201ENST00000191018 TMOD3Q9NYL9 352 aa23.02■■□□□ 1.28
CTSA-201ENST00000191018 C9orf78Q9NZ63 289 aaPredicted RBP23.02■■□□□ 1.28
CTSA-201ENST00000191018 ANKRD13DQ6ZTN6 518 aa23.02■■□□□ 1.28
CTSA-201ENST00000191018 TUBGCP6Q96RT7 1819 aa23.02■■□□□ 1.28
CTSA-201ENST00000191018 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
CTSA-201ENST00000191018 GRM8O00222 908 aa23.01■■□□□ 1.27
CTSA-201ENST00000191018 SRGAP3O43295 1099 aa23.01■■□□□ 1.27
CTSA-201ENST00000191018 ADAMTS2O95450 1211 aa23.01■■□□□ 1.27
CTSA-201ENST00000191018 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
CTSA-201ENST00000191018 NBPF26B4DH59 902 aa23■■□□□ 1.27
CTSA-201ENST00000191018 PIP4K2AP48426 406 aaPredicted RBP23■■□□□ 1.27
CTSA-201ENST00000191018 NEXNQ0ZGT2 675 aa23■■□□□ 1.27
CTSA-201ENST00000191018 NUP188Q5SRE5 1749 aa23■■□□□ 1.27
CTSA-201ENST00000191018 NBPF14Q5TI25 921 aa23■■□□□ 1.27
CTSA-201ENST00000191018 NBPF10Q6P3W6 841 aaKnown RBP23■■□□□ 1.27
CTSA-201ENST00000191018 NBPF15Q8N660 670 aa23■■□□□ 1.27
CTSA-201ENST00000191018 NEURL1BA8MQ27 555 aa23■■□□□ 1.27
CTSA-201ENST00000191018 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
CTSA-201ENST00000191018 SPATA31A1Q5TZJ5 1347 aa22.99■■□□□ 1.27
CTSA-201ENST00000191018 SLIT2O94813 1529 aa22.99■■□□□ 1.27
CTSA-201ENST00000191018 EXOC5O00471 708 aa22.99■■□□□ 1.27
CTSA-201ENST00000191018 RAB11FIP3O75154 756 aa22.99■■□□□ 1.27
CTSA-201ENST00000191018 PIGBQ92521 554 aa22.99■■□□□ 1.27
CTSA-201ENST00000191018 THRAP3Q9Y2W1 955 aaKnown RBP22.99■■□□□ 1.27
CTSA-201ENST00000191018 PTCD1O75127 700 aaKnown RBP22.98■■□□□ 1.27
CTSA-201ENST00000191018 PDE1AP54750 535 aa22.98■■□□□ 1.27
CTSA-201ENST00000191018 TBC1D9Q6ZT07 1266 aa22.98■■□□□ 1.27
CTSA-201ENST00000191018 ANP32EQ9BTT0 268 aa22.98■■□□□ 1.27
CTSA-201ENST00000191018 CDCA7Q9BWT1 371 aaPredicted RBP22.98■■□□□ 1.27
CTSA-201ENST00000191018 CDC45O75419 566 aa22.98■■□□□ 1.27
CTSA-201ENST00000191018 PLBD2Q8NHP8 589 aa22.98■■□□□ 1.27
CTSA-201ENST00000191018 KAZALD1Q96I82 304 aa22.98■■□□□ 1.27
CTSA-201ENST00000191018 BCL9O00512 1426 aa22.97■■□□□ 1.27
CTSA-201ENST00000191018 GCKRQ14397 625 aa22.97■■□□□ 1.27
CTSA-201ENST00000191018 MYD88Q99836 296 aa22.97■■□□□ 1.27
CTSA-201ENST00000191018 C22orf23Q9BZE7 217 aa22.97■■□□□ 1.27
CTSA-201ENST00000191018 SURF6O75683 361 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms