RNA–Protein interactions for RNA: ENST00000172229.7

NGFR-201, Transcript of nerve growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NGFR, Length 3,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGFR-201ENST00000172229 PPFIA3O75145 1194 aa20.12■□□□□ 0.81
NGFR-201ENST00000172229 GCP02774 474 aa20.12■□□□□ 0.81
NGFR-201ENST00000172229 FOSBP53539 338 aa20.11■□□□□ 0.81
NGFR-201ENST00000172229 AACSQ86V21 672 aa20.11■□□□□ 0.81
NGFR-201ENST00000172229 SPATA31D1Q6ZQQ2 1576 aa20.11■□□□□ 0.81
NGFR-201ENST00000172229 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
NGFR-201ENST00000172229 BOLA2Q9H3K6 86 aa20.1■□□□□ 0.81
NGFR-201ENST00000172229 SKOR2Q2VWA4 1001 aaPredicted RBP20.1■□□□□ 0.81
NGFR-201ENST00000172229 CLASRPQ8N2M8 674 aaKnown RBP20.09■□□□□ 0.81
NGFR-201ENST00000172229 ARHGEF10O15013 1369 aa20.09■□□□□ 0.81
NGFR-201ENST00000172229 RGS12O14924 1447 aa20.09■□□□□ 0.81
NGFR-201ENST00000172229 NSFL1CQ9UNZ2 370 aaKnown RBP20.09■□□□□ 0.81
NGFR-201ENST00000172229 ATP5J2-PTCD1G3V325 749 aa20.09■□□□□ 0.81
NGFR-201ENST00000172229 PTCD1O75127 700 aaKnown RBP20.09■□□□□ 0.81
NGFR-201ENST00000172229 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
NGFR-201ENST00000172229 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.81
NGFR-201ENST00000172229 PTMAP06454 111 aaKnown RBP20.08■□□□□ 0.81
NGFR-201ENST00000172229 EIF4A1P60842 406 aaKnown RBP20.08■□□□□ 0.81
NGFR-201ENST00000172229 IP6K1Q92551 441 aa20.08■□□□□ 0.81
NGFR-201ENST00000172229 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
NGFR-201ENST00000172229 AXIN2Q9Y2T1 843 aa20.08■□□□□ 0.8
NGFR-201ENST00000172229 VPS37CA5D8V6 355 aaPredicted RBP20.07■□□□□ 0.8
NGFR-201ENST00000172229 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
NGFR-201ENST00000172229 FIBPO43427 364 aa20.07■□□□□ 0.8
NGFR-201ENST00000172229 STK3Q13188 491 aa20.07■□□□□ 0.8
NGFR-201ENST00000172229 EDC3Q96F86 508 aaKnown RBP20.07■□□□□ 0.8
NGFR-201ENST00000172229 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
NGFR-201ENST00000172229 KRT28Q7Z3Y7 464 aa20.06■□□□□ 0.8
NGFR-201ENST00000172229 FSD2A1L4K1 749 aa20.05■□□□□ 0.8
NGFR-201ENST00000172229 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
NGFR-201ENST00000172229 NFATC2IPQ8NCF5 419 aa20.05■□□□□ 0.8
NGFR-201ENST00000172229 PRIM1P49642 420 aaKnown RBP20.05■□□□□ 0.8
NGFR-201ENST00000172229 FERMT3Q86UX7 667 aa20.05■□□□□ 0.8
NGFR-201ENST00000172229 CNTROBQ8N137 903 aa20.05■□□□□ 0.8
NGFR-201ENST00000172229 KIF1BPQ96EK5 621 aa20.05■□□□□ 0.8
NGFR-201ENST00000172229 CCDC83Q8IWF9 413 aa20.04■□□□□ 0.8
NGFR-201ENST00000172229 ESPNB1AK53 854 aa20.04■□□□□ 0.8
NGFR-201ENST00000172229 ZSCAN23Q3MJ62 389 aa20.04■□□□□ 0.8
NGFR-201ENST00000172229 NECAB1Q8N987 351 aa20.04■□□□□ 0.8
NGFR-201ENST00000172229 JAKMIP1Q96N16 626 aaKnown RBP20.04■□□□□ 0.8
NGFR-201ENST00000172229 MYD88Q99836 296 aa20.04■□□□□ 0.8
NGFR-201ENST00000172229 AGLP35573 1532 aa20.03■□□□□ 0.8
NGFR-201ENST00000172229 DNAJC2Q99543 621 aaKnown RBP20.03■□□□□ 0.8
NGFR-201ENST00000172229 DLG5Q8TDM6 1919 aa20.03■□□□□ 0.8
NGFR-201ENST00000172229 DDIT3P35638 169 aa20.03■□□□□ 0.8
NGFR-201ENST00000172229 RASEFQ8IZ41 740 aa20.02■□□□□ 0.8
NGFR-201ENST00000172229 USP31Q70CQ4 1352 aa20.02■□□□□ 0.8
NGFR-201ENST00000172229 FGD1P98174 961 aa20.02■□□□□ 0.8
NGFR-201ENST00000172229 FSD1Q9BTV5 496 aa20.02■□□□□ 0.8
NGFR-201ENST00000172229 DBF4Q9UBU7 674 aaPredicted RBP20.02■□□□□ 0.8
NGFR-201ENST00000172229 ZDHHC9Q9Y397 364 aa20.02■□□□□ 0.8
NGFR-201ENST00000172229 RNMTO43148 476 aaKnown RBP20.02■□□□□ 0.79
NGFR-201ENST00000172229 LMBRD1Q9NUN5 540 aa20.02■□□□□ 0.79
NGFR-201ENST00000172229 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.01■□□□□ 0.79
NGFR-201ENST00000172229 MSNP26038 577 aaKnown RBP20.01■□□□□ 0.79
NGFR-201ENST00000172229 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
NGFR-201ENST00000172229 KLHL40Q2TBA0 621 aa20.01■□□□□ 0.79
NGFR-201ENST00000172229 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
NGFR-201ENST00000172229 GADD45BO75293 160 aaPredicted RBP20■□□□□ 0.79
NGFR-201ENST00000172229 COPS6Q7L5N1 327 aa20■□□□□ 0.79
NGFR-201ENST00000172229 GPT2Q8TD30 523 aa20■□□□□ 0.79
NGFR-201ENST00000172229 NEUROD6Q96NK8 337 aa20■□□□□ 0.79
NGFR-201ENST00000172229 ERBB4Q15303 1308 aa20■□□□□ 0.79
NGFR-201ENST00000172229 BEND3Q5T5X7 828 aa20■□□□□ 0.79
NGFR-201ENST00000172229 XAGE3Q8WTP9 111 aa20■□□□□ 0.79
NGFR-201ENST00000172229 RBSNQ9H1K0 784 aa20■□□□□ 0.79
NGFR-201ENST00000172229 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
NGFR-201ENST00000172229 KCNH5Q8NCM2 988 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 FAM227BQ96M60 508 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 BICC1Q9H694 974 aaKnown RBP19.99■□□□□ 0.79
NGFR-201ENST00000172229 IBTKQ9P2D0 1353 aaPredicted RBP19.99■□□□□ 0.79
NGFR-201ENST00000172229 ANKRD26Q9UPS8 1709 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 TECPR2O15040 1411 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
NGFR-201ENST00000172229 NEXNQ0ZGT2 675 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 AKAP4Q5JQC9 854 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 SUCLG2Q96I99 432 aa19.99■□□□□ 0.79
NGFR-201ENST00000172229 CWC22Q9HCG8 908 aaKnown RBP19.99■□□□□ 0.79
NGFR-201ENST00000172229 CHGBP05060 677 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 TMEM63CQ9P1W3 806 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 PTH1RQ03431 593 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 FAM173BQ6P4H8 233 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 AK2P54819 239 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 UBE3BQ7Z3V4 1068 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 SSH3Q8TE77 659 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 STRN4Q9NRL3 753 aa19.98■□□□□ 0.79
NGFR-201ENST00000172229 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
NGFR-201ENST00000172229 ATF3P18847 181 aa19.97■□□□□ 0.79
NGFR-201ENST00000172229 GPATCH3Q96I76 525 aa19.97■□□□□ 0.79
NGFR-201ENST00000172229 HSPA2P54652 639 aa19.96■□□□□ 0.79
NGFR-201ENST00000172229 CNPY2Q9Y2B0 182 aa19.96■□□□□ 0.79
NGFR-201ENST00000172229 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.96■□□□□ 0.79
NGFR-201ENST00000172229 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
NGFR-201ENST00000172229 LRRC2Q9BYS8 371 aa19.96■□□□□ 0.79
NGFR-201ENST00000172229 ADCK5Q3MIX3 580 aa19.96■□□□□ 0.79
NGFR-201ENST00000172229 USP16Q9Y5T5 823 aa19.96■□□□□ 0.79
NGFR-201ENST00000172229 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
NGFR-201ENST00000172229 GIGYF1O75420 1035 aaPredicted RBP19.95■□□□□ 0.78
NGFR-201ENST00000172229 DDX58O95786 925 aaKnown RBP19.95■□□□□ 0.78
NGFR-201ENST00000172229 KAT6BQ8WYB5 2073 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms