RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HEG1Q9ULI3 1381 aa10.16□□□□□ -0.78
VAMP3-201ENST00000054666 ANXA1P04083 346 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 GSE1Q14687 1217 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 RABEP1Q15276 862 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 SLC52A2Q9HAB3 445 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.78
VAMP3-201ENST00000054666 AOX1Q06278 1338 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 K7ELQ4 463 aaPredicted RBP10.15□□□□□ -0.78
VAMP3-201ENST00000054666 ERC2O15083 957 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 ALDH1L1O75891 902 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 PHKG2P15735 406 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 HSP90AB4PQ58FF6 505 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 PPP1R42Q7Z4L9 355 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 CABLES1Q8TDN4 633 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 PKD1L3Q7Z443 1732 aa10.15□□□□□ -0.78
VAMP3-201ENST00000054666 XIRP1Q702N8 1843 aaKnown RBP10.14□□□□□ -0.79
VAMP3-201ENST00000054666 MRC1P22897 1456 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 KSR2Q6VAB6 950 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 KIF2CQ99661 725 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 C9orf78Q9NZ63 289 aaPredicted RBP10.14□□□□□ -0.79
VAMP3-201ENST00000054666 MAP3K2Q9Y2U5 619 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 SALL3Q9BXA9 1300 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 SURF6O75683 361 aaKnown RBP10.14□□□□□ -0.79
VAMP3-201ENST00000054666 ZNF790Q6PG37 636 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 KIF1BPQ96EK5 621 aa10.14□□□□□ -0.79
VAMP3-201ENST00000054666 DDX21Q9NR30 783 aaKnown RBP eCLIP10.14□□□□□ -0.79
VAMP3-201ENST00000054666 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
VAMP3-201ENST00000054666 TUBGCP6Q96RT7 1819 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 TRIM6-TRIM34B2RNG4 842 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 NBPF7P0C2Y1 421 aaPredicted RBP10.13□□□□□ -0.79
VAMP3-201ENST00000054666 POLA2Q14181 598 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 BRINP3Q76B58 766 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 DCAF5Q96JK2 942 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 USP26Q9BXU7 913 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 PARP4Q9UKK3 1724 aaKnown RBP10.13□□□□□ -0.79
VAMP3-201ENST00000054666 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
VAMP3-201ENST00000054666 PROSER3Q2NL68 480 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 STAP2Q9UGK3 403 aa10.13□□□□□ -0.79
VAMP3-201ENST00000054666 C5P01031 1676 aa10.12□□□□□ -0.79
VAMP3-201ENST00000054666 MCCP23508 829 aa10.12□□□□□ -0.79
VAMP3-201ENST00000054666 TSHZ3Q63HK5 1081 aa10.12□□□□□ -0.79
VAMP3-201ENST00000054666 RILPL2Q969X0 211 aa10.12□□□□□ -0.79
VAMP3-201ENST00000054666 IL1RAPL2Q9NP60 686 aa10.12□□□□□ -0.79
VAMP3-201ENST00000054666 PRDM11Q9NQV5 511 aa10.12□□□□□ -0.79
VAMP3-201ENST00000054666 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 ST18O60284 1047 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 NEXNQ0ZGT2 675 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 SLC39A6Q13433 755 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 LINS1Q8NG48 757 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 RHPN1Q8TCX5 695 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
VAMP3-201ENST00000054666 MTX1Q13505 466 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
VAMP3-201ENST00000054666 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
VAMP3-201ENST00000054666 FMNL2Q96PY5 1086 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
VAMP3-201ENST00000054666 WDR17Q8IZU2 1322 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 AK9Q5TCS8 1911 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 GRM8O00222 908 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
VAMP3-201ENST00000054666 MCM4P33991 863 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 CABP4P57796 275 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
VAMP3-201ENST00000054666 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 CYP27B1O15528 508 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
VAMP3-201ENST00000054666 MYL6BP14649 208 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 CWF19L2Q2TBE0 894 aaKnown RBP10.09□□□□□ -0.79
VAMP3-201ENST00000054666 NUTM1Q86Y26 1132 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 SOS2Q07890 1332 aaPredicted RBP10.09□□□□□ -0.79
VAMP3-201ENST00000054666 DDIT3P35638 169 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 CNTROBQ8N137 903 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 CLASRPQ8N2M8 674 aaKnown RBP10.09□□□□□ -0.79
VAMP3-201ENST00000054666 ZNF496Q96IT1 587 aaPredicted RBP10.09□□□□□ -0.79
VAMP3-201ENST00000054666 ANO2Q9NQ90 1003 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 SLAIN2Q9P270 581 aa10.09□□□□□ -0.79
VAMP3-201ENST00000054666 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
VAMP3-201ENST00000054666 ABCA3Q99758 1704 aa10.08□□□□□ -0.8
VAMP3-201ENST00000054666 TTC41PQ6P2S7 1318 aa10.08□□□□□ -0.8
VAMP3-201ENST00000054666 ZNF335Q9H4Z2 1342 aaPredicted RBP10.08□□□□□ -0.8
VAMP3-201ENST00000054666 CHMLP26374 656 aa10.08□□□□□ -0.8
VAMP3-201ENST00000054666 PDIA6Q15084 440 aa10.08□□□□□ -0.8
VAMP3-201ENST00000054666 UTYO14607 1347 aa10.07□□□□□ -0.8
VAMP3-201ENST00000054666 PTMSP20962 102 aa10.07□□□□□ -0.8
VAMP3-201ENST00000054666 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
VAMP3-201ENST00000054666 FOXD4L1Q9NU39 408 aa10.07□□□□□ -0.8
VAMP3-201ENST00000054666 EPB41L2O43491 1005 aaKnown RBP10.07□□□□□ -0.8
VAMP3-201ENST00000054666 GLRX3O76003 335 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms