RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
RTFDC1-201ENST00000023939 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
RTFDC1-201ENST00000023939 PROSER3Q2NL68 480 aa17.83■□□□□ 0.44
RTFDC1-201ENST00000023939 TTC5Q8N0Z6 440 aa17.83■□□□□ 0.44
RTFDC1-201ENST00000023939 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
RTFDC1-201ENST00000023939 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
RTFDC1-201ENST00000023939 GLI3P10071 1580 aa17.82■□□□□ 0.44
RTFDC1-201ENST00000023939 DDX58O95786 925 aaKnown RBP17.81■□□□□ 0.44
RTFDC1-201ENST00000023939 UPF2Q9HAU5 1272 aaKnown RBP17.81■□□□□ 0.44
RTFDC1-201ENST00000023939 COL16A1Q07092 1604 aaPredicted RBP17.81■□□□□ 0.44
RTFDC1-201ENST00000023939 ANXA1P04083 346 aa17.81■□□□□ 0.44
RTFDC1-201ENST00000023939 PLEKHM2Q8IWE5 1019 aa17.81■□□□□ 0.44
RTFDC1-201ENST00000023939 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
RTFDC1-201ENST00000023939 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
RTFDC1-201ENST00000023939 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
RTFDC1-201ENST00000023939 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
RTFDC1-201ENST00000023939 PAPPAQ13219 1627 aa17.79■□□□□ 0.44
RTFDC1-201ENST00000023939 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
RTFDC1-201ENST00000023939 FBXO41Q8TF61 875 aa17.79■□□□□ 0.44
RTFDC1-201ENST00000023939 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
RTFDC1-201ENST00000023939 MAP3K2Q9Y2U5 619 aa17.79■□□□□ 0.44
RTFDC1-201ENST00000023939 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
RTFDC1-201ENST00000023939 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 LRP10Q7Z4F1 713 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 LINS1Q8NG48 757 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 TNS2Q63HR2 1409 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 PLCH1Q4KWH8 1693 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 POLA2Q14181 598 aa17.78■□□□□ 0.44
RTFDC1-201ENST00000023939 UTYO14607 1347 aa17.77■□□□□ 0.43
RTFDC1-201ENST00000023939 MTX1Q13505 466 aa17.76■□□□□ 0.43
RTFDC1-201ENST00000023939 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
RTFDC1-201ENST00000023939 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
RTFDC1-201ENST00000023939 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
RTFDC1-201ENST00000023939 KCPQ6ZWJ8 1503 aa17.75■□□□□ 0.43
RTFDC1-201ENST00000023939 NBPF7P0C2Y1 421 aaPredicted RBP17.75■□□□□ 0.43
RTFDC1-201ENST00000023939 TTC22Q5TAA0 569 aa17.75■□□□□ 0.43
RTFDC1-201ENST00000023939 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
RTFDC1-201ENST00000023939 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
RTFDC1-201ENST00000023939 DDX54Q8TDD1 881 aaKnown RBP17.74■□□□□ 0.43
RTFDC1-201ENST00000023939 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
RTFDC1-201ENST00000023939 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
RTFDC1-201ENST00000023939 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
RTFDC1-201ENST00000023939 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
RTFDC1-201ENST00000023939 LRP6O75581 1613 aa17.73■□□□□ 0.43
RTFDC1-201ENST00000023939 SMARCA5O60264 1052 aaPredicted RBP17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 TOM1O60784 492 aa17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 GSPT1P15170 499 aaKnown RBP17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 PPP1R42Q7Z4L9 355 aa17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 SALL3Q9BXA9 1300 aa17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 EXOC6BQ9Y2D4 811 aa17.72■□□□□ 0.43
RTFDC1-201ENST00000023939 GRM8O00222 908 aa17.71■□□□□ 0.43
RTFDC1-201ENST00000023939 CDC45O75419 566 aa17.71■□□□□ 0.43
RTFDC1-201ENST00000023939 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
RTFDC1-201ENST00000023939 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.43
RTFDC1-201ENST00000023939 CDCA7Q9BWT1 371 aaPredicted RBP17.71■□□□□ 0.43
RTFDC1-201ENST00000023939 C9orf78Q9NZ63 289 aaPredicted RBP17.71■□□□□ 0.43
RTFDC1-201ENST00000023939 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 MYL6BP14649 208 aa17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
RTFDC1-201ENST00000023939 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 CWF19L2Q2TBE0 894 aaKnown RBP17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 HSP90AB4PQ58FF6 505 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 C22orf23Q9BZE7 217 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 STAP2Q9UGK3 403 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 NRAPQ86VF7 1730 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 AOX1Q06278 1338 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 RBM25P49756 843 aaKnown RBP17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 PDE1AP54750 535 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 THRAP3Q9Y2W1 955 aaKnown RBP17.69■□□□□ 0.42
RTFDC1-201ENST00000023939 COL15A1P39059 1388 aa17.68■□□□□ 0.42
RTFDC1-201ENST00000023939 NEURL1BA8MQ27 555 aa17.68■□□□□ 0.42
RTFDC1-201ENST00000023939 APBB1O00213 710 aa17.68■□□□□ 0.42
RTFDC1-201ENST00000023939 PLBD2Q8NHP8 589 aa17.68■□□□□ 0.42
RTFDC1-201ENST00000023939 NBPF26B4DH59 902 aa17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 NBPF10Q6P3W6 841 aaKnown RBP17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 NBPF15Q8N660 670 aa17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 GCKRQ14397 625 aa17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 TEX13AQ9BXU3 409 aaPredicted RBP17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 DAXXQ9UER7 740 aaPredicted RBP17.67■□□□□ 0.42
RTFDC1-201ENST00000023939 EXOC5O00471 708 aa17.66■□□□□ 0.42
RTFDC1-201ENST00000023939 BECN1Q14457 450 aa17.66■□□□□ 0.42
RTFDC1-201ENST00000023939 KIF1BPQ96EK5 621 aa17.66■□□□□ 0.42
RTFDC1-201ENST00000023939 KAZALD1Q96I82 304 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms