RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 XAGE3Q8WTP9 111 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 ECHDC1Q9NTX5 307 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 ATP10AO60312 1499 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 CTCFLQ8NI51 663 aaPredicted RBP13.07□□□□□ -0.32
RGPD5-201ENST00000016946 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 PDILTQ8N807 584 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 NLRP3Q96P20 1036 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 NPATQ14207 1427 aa13.06□□□□□ -0.32
RGPD5-201ENST00000016946 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
RGPD5-201ENST00000016946 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
RGPD5-201ENST00000016946 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
RGPD5-201ENST00000016946 SEC63Q9UGP8 760 aaKnown RBP13.06□□□□□ -0.32
RGPD5-201ENST00000016946 CASTP20810 708 aaKnown RBP13.06□□□□□ -0.32
RGPD5-201ENST00000016946 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
RGPD5-201ENST00000016946 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
RGPD5-201ENST00000016946 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
RGPD5-201ENST00000016946 PRAG1Q86YV5 1406 aa13.06□□□□□ -0.32
RGPD5-201ENST00000016946 TRPM2O94759 1503 aa13.06□□□□□ -0.32
RGPD5-201ENST00000016946 STIM1Q13586 685 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 BAG3O95817 575 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
RGPD5-201ENST00000016946 SPTY2D1Q68D10 685 aaPredicted RBP13.05□□□□□ -0.32
RGPD5-201ENST00000016946 RNF214Q8ND24 703 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 WDR62O43379 1518 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 BTG4Q9NY30 223 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 ANKRD18AQ8IVF6 992 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
RGPD5-201ENST00000016946 CAVIN1Q6NZI2 390 aaKnown RBP13.05□□□□□ -0.32
RGPD5-201ENST00000016946 SNRKQ9NRH2 765 aa13.05□□□□□ -0.32
RGPD5-201ENST00000016946 MTHFSDQ2M296 383 aaKnown RBP13.04□□□□□ -0.32
RGPD5-201ENST00000016946 UQCRFS1P1P0C7P4 283 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
RGPD5-201ENST00000016946 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
RGPD5-201ENST00000016946 BACH2Q9BYV9 841 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 ZNF213O14771 459 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 POLD1P28340 1107 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
RGPD5-201ENST00000016946 RTCBQ9Y3I0 505 aaKnown RBP13.04□□□□□ -0.32
RGPD5-201ENST00000016946 NFKBIBQ15653 356 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 SIRT1Q96EB6 747 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
RGPD5-201ENST00000016946 GOLIM4O00461 696 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 SYCP1Q15431 976 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 ARHGAP45Q92619 1136 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
RGPD5-201ENST00000016946 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 TPTE2Q6XPS3 522 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
RGPD5-201ENST00000016946 C20orf194Q5TEA3 1177 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 IP6K1Q92551 441 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 EYA1Q99502 592 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 KSR2Q6VAB6 950 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 UPF3BQ9BZI7 483 aaKnown RBP13.03□□□□□ -0.32
RGPD5-201ENST00000016946 SMC2O95347 1197 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 PDCL3Q9H2J4 239 aa13.03□□□□□ -0.32
RGPD5-201ENST00000016946 MYO1BO43795 1136 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 GPS2Q13227 327 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 TNIP1Q15025 636 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 SPATA32Q96LK8 384 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 CABP5Q9NP86 173 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.32
RGPD5-201ENST00000016946 FEZ1Q99689 392 aa13.02□□□□□ -0.32
RGPD5-201ENST00000016946 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
RGPD5-201ENST00000016946 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
RGPD5-201ENST00000016946 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
RGPD5-201ENST00000016946 TRAK2O60296 914 aa13.02□□□□□ -0.33
RGPD5-201ENST00000016946 HOXC9P31274 260 aa13.02□□□□□ -0.33
RGPD5-201ENST00000016946 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
RGPD5-201ENST00000016946 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
RGPD5-201ENST00000016946 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
RGPD5-201ENST00000016946 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
RGPD5-201ENST00000016946 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
RGPD5-201ENST00000016946 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
RGPD5-201ENST00000016946 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
RGPD5-201ENST00000016946 CCDC173Q0VFZ6 552 aa13□□□□□ -0.33
RGPD5-201ENST00000016946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13□□□□□ -0.33
RGPD5-201ENST00000016946 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
RGPD5-201ENST00000016946 GSTO1P78417 241 aa13□□□□□ -0.33
RGPD5-201ENST00000016946 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
RGPD5-201ENST00000016946 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
RGPD5-201ENST00000016946 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
RGPD5-201ENST00000016946 PAF1Q8N7H5 531 aa13□□□□□ -0.33
RGPD5-201ENST00000016946 TNMDQ9H2S6 317 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms