RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 LIPJQ5W064 366 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CMTM8Q8IZV2 173 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 DNAJC22Q8N4W6 341 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CHST14Q8NCH0 376 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 FAM83FQ8NEG4 500 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 GPR156Q8NFN8 814 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CFAP97Q9P2B7 532 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 UPK1BO75841 260 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 STSP08842 583 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ANXA4P09525 319 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 HLA-FP30511 346 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 GGT2P36268 569 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 IDH2P48735 452 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MVDP53602 400 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 AP1S2P56377 157 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■□□□□ 10
PHGDH-233ENST00000642021 CLPPQ16740 277 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PLEKHS1Q5SXH7 462 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 STEAP3Q658P3 488 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ARMC8Q8IUR7 673 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 OR4K1Q8NGD4 311 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 FIBINQ8TAL6 211 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MED8Q96G25 268 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CDADC1Q9BWV3 514 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 OR51E2Q9H255 320 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 SH3BP4Q9P0V3 963 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ANKMY1Q9P2S6 941 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PADI2Q9Y2J8 665 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 A8MU76 341 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 DPM1O60762 260 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ETFAP13804 333 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 GJA1P17302 382 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 TPTEP56180 551 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 SELENOWP63302 87 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ELP6Q0PNE2 266 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF385BQ569K4 471 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
PHGDH-233ENST00000642021 SGK2Q9HBY8 427 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ADPRHL2Q9NX46 363 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF226Q9NYT6 803 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 PCDHGA2Q9Y5H1 932 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 LOC100506127A0A0U1RQW1 187 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 AGAP5A6NIR3 686 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 J3KTA2 159 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 HOXA2O43364 376 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 TLL1O43897 1013 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 PTHP01270 115 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 GBAP04062 536 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 CDK1P06493 297 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 CKMP06732 381 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ADRA2AP08913 450 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
PHGDH-233ENST00000642021 CTSKP43235 329 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 CYP4F2P78329 520 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 SP140Q13342 867 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 TBCEQ15813 527 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-233ENST00000642021 KCNJ8Q15842 424 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 TPGS2Q68CL5 300 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 SLC46A3Q7Z3Q1 461 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 NPAS3Q8IXF0 933 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 LMNTD1Q8N9Z9 388 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 MMP27Q9H306 513 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 TAS2R16Q9NYV7 291 aa13.31□□□□□ -0.28
PHGDH-233ENST00000642021 CAB39Q9Y376 341 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-233ENST00000642021 GPC6Q9Y625 555 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-233ENST00000642021 SLC16A5O15375 505 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 KCNK2O95069 426 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 DNTTP04053 509 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 POU2F1P14859 743 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 SPNP16150 400 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 UGT2B10P36537 528 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 CRATP43155 626 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 C21orf58P58505 322 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-233ENST00000642021 C22orf39Q6P5X5 142 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 OR10G2Q8NGC3 310 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF675Q8TD23 568 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 LMLNQ96KR4 655 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-233ENST00000642021 PLCXD1Q9NUJ7 323 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 FKBP14Q9NWM8 211 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 SPASTQ9UBP0 616 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 BTNL2Q9UIR0 455 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 POU2F3Q9UKI9 436 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 RBMX2Q9Y388 322 aaKnown RBP13.3□□□□□ -0.28
PHGDH-233ENST00000642021 TPPPO94811 219 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 GABRB1P18505 474 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 PREPP48147 710 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 CDH12P55289 794 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 CCL23P55773 120 aa13.3□□□□□ -0.28
PHGDH-233ENST00000642021 TUBA1BP68363 451 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms