RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 DOLKQ9UPQ8 538 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 RUVBL1Q9Y265 456 aaKnown RBP12.56□□□□□ -0.4
PHGDH-221ENST00000641573 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 PCNX2A6NKB5 2137 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 A0A1B0GTW7 788 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 A0A1B0GVT2 93 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 TRBC2A0A5B9 178 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 FEZF1A0PJY2 475 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 OR6C74A6NCV1 312 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ANKDD1BA6NHY2 528 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 CCDC154A6NI56 674 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ANGPT2O15123 496 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 YY2O15391 372 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 AQP9O43315 295 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 OR1F1O43749 312 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 TGFB1P01137 390 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 PCSK2P16519 638 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 SDC1P18827 310 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 HRH2P25021 359 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 SERPINB1P30740 379 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ELF3P78545 371 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ACSM2AQ08AH3 577 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 TBL3Q12788 808 aaKnown RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 RCAN2Q14206 197 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 KIAA1614Q5VZ46 1190 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ACSM2BQ68CK6 577 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 RABEPKQ7Z6M1 372 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 RBM12BQ8IXT5 1001 aaKnown RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 FAM9CQ8IZT9 166 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 C1orf52Q8N6N3 182 aaKnown RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ANKRD53Q8N9V6 530 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 PCYOX1LQ8NBM8 494 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 ZNF548Q8NEK5 533 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 GPR156Q8NFN8 814 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 OR10G6Q8NH81 332 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 CLHC1Q8NHS4 586 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 SLC22A18Q96BI1 424 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 EBPLQ9BY08 206 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 TWSG1Q9GZX9 223 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 OR51B5Q9H339 312 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 MMADHCQ9H3L0 296 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 TMEM74BQ9NUR3 256 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 PPT2Q9UMR5 302 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 RAXQ9Y2V3 346 aa12.55□□□□□ -0.4
PHGDH-221ENST00000641573 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.55□□□□□ -0.4
PHGDH-221ENST00000641573 A0A088AWK7 358 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 A0A1W2PP18 115 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 DYTNA2CJ06 578 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 CFLARO15519 480 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 PIAS2O75928 621 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ANXA6P08133 673 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 GNSP15586 552 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 UGT2B7P16662 529 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-221ENST00000641573 TACR1P25103 407 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 PTX3P26022 381 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-221ENST00000641573 GRK3P35626 688 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 CTSKP43235 329 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 MAZP56270 477 aaKnown RBP12.54□□□□□ -0.4
PHGDH-221ENST00000641573 CLDN8P56748 225 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 CYP4F2P78329 520 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 RAE1P78406 368 aaKnown RBP12.54□□□□□ -0.4
PHGDH-221ENST00000641573 HHEXQ03014 270 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 DUOXA1Q1HG43 343 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 SPIN4Q56A73 249 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 COQ5Q5HYK3 327 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ZNF425Q6IV72 752 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 HACD2Q6Y1H2 254 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 TMEM26Q6ZUK4 368 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 RETREG3Q86VR2 466 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 PLD3Q8IV08 490 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 SCUBE1Q8IWY4 988 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ULK2Q8IYT8 1036 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 PGAM4Q8N0Y7 254 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 SDR16C5Q8N3Y7 309 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ARL14Q8N4G2 192 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 KRTCAP2Q8N6L1 136 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 AVL9Q8NBF6 648 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 GLB1L3Q8NCI6 653 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-221ENST00000641573 FAM13CQ8NE31 585 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 FLVCR1-AS1Q8TAF5 88 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ADAMTS14Q8WXS8 1223 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 VPS33AQ96AX1 596 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 CLPTM1LQ96KA5 538 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 TSSK3Q96PN8 268 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 OR2A14Q96R47 310 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 DPH7Q9BTV6 452 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ERVMER34-1Q9H9K5 563 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 WDR41Q9HAD4 459 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ACTR10Q9NZ32 417 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 SNX7Q9UNH6 387 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 KLHL20Q9Y2M5 609 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 ACACAQ13085 2346 aa12.54□□□□□ -0.4
PHGDH-221ENST00000641573 GSAPA4D1B5 854 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 ASPDHA6ND91 283 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 A8MUI8 341 aa12.53□□□□□ -0.4
PHGDH-221ENST00000641573 C2orf74A8MZ97 194 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms