RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ARNT2Q9HBZ2 717 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 SAMD4AQ9UPU9 718 aaKnown RBP13.27□□□□□ -0.28
SCARB2-227ENST00000640957 GSAPA4D1B5 854 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 TPST2O60704 377 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 TOXO94900 526 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 PDYNP01213 254 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 IRF1P10914 325 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 AIF1P55008 147 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 MLLT6P55198 1093 aaPredicted RBP13.27□□□□□ -0.29
SCARB2-227ENST00000640957 P2RY14Q15391 338 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 SPRYD7Q5W111 196 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 ZSWIM9Q86XI8 627 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 OR10G2Q8NGC3 310 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 RIT1Q92963 219 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 MAGEB10Q96LZ2 347 aaPredicted RBP13.27□□□□□ -0.29
SCARB2-227ENST00000640957 PPP3R2Q96LZ3 170 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 BCL7BQ9BQE9 202 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 ACAT2Q9BWD1 397 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 ACPTQ9BZG2 426 aa13.27□□□□□ -0.29
SCARB2-227ENST00000640957 NDRG2Q9UN36 371 aaKnown RBP13.27□□□□□ -0.29
SCARB2-227ENST00000640957 PLK4O00444 970 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TAPBPO15533 448 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 AOC2O75106 756 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 EPN2O95208 641 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 ITPKAP23677 461 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 GRIK2Q13002 908 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 GRB14Q14449 540 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 INSL4Q14641 139 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TBCEQ15813 527 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 EXOC3L2Q2M3D2 409 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 PTCHD4Q6ZW05 846 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 OR4M2Q8NGB6 313 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 GPR150Q8NGU9 434 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 WACQ9BTA9 647 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 KATNBL1Q9H079 304 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 FAM83DQ9H4H8 585 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 LCTP09848 1927 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 YY2O15391 372 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 OR7A10O76100 309 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 NPPAP01160 153 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 C9P02748 559 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 ALPIP09923 528 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 DDCP20711 480 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TIE1P35590 1138 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 CXCR4P61073 352 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TAF12Q16514 161 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 FAM110CQ1W6H9 321 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SPATS1Q496A3 300 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 ZC3H12BQ5HYM0 836 aaKnown RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 C16orf62Q7Z3J2 963 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 FAM124AQ86V42 546 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 LGI4Q8N135 537 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 AADATQ8N5Z0 425 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SH3KBP1Q96B97 665 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 NACC2Q96BF6 587 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 COL21A1Q96P44 957 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 MTERF1Q99551 399 aaKnown RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 POLR1EQ9GZS1 481 aaKnown RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SLC22A4Q9H015 551 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 CFL2Q9Y281 166 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 MYO9BQ13459 2157 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 PLXNA1Q9UIW2 1896 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 ATP6V1G2-DDX39BF2Z307 99 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 STX7O15400 261 aaKnown RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 PLA2G10O15496 165 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 CCNDBP1O95273 360 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 OTCP00480 354 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 IL6P05231 212 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SOX9P48436 509 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TBX4P57082 545 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 LRRC74AQ0VAA2 488 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-227ENST00000640957 LINC00299Q6ZSB3 139 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 BBS7Q8IWZ6 715 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 OR5AK3PQ8NH89 298 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 SRRQ9GZT4 340 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 CLMPQ9H6B4 373 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 ATP13A1Q9HD20 1204 aa13.26□□□□□ -0.29
SCARB2-227ENST00000640957 FAM240BA0A1B0GVZ2 78 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 SNTNA6NMZ2 147 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 KCNK5O95279 499 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 CRATP43155 626 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 VMACQ2NL98 169 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 MS4A13Q5J8X5 152 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 RAB41Q5JT25 222 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF57Q68EA5 555 aaPredicted RBP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 FRMPD2BQ6IN97 320 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ADNP2Q6IQ32 1131 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 FBXL6Q8N531 539 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 LMNTD1Q8N9Z9 388 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms