RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SIAEQ9HAT2 523 aa15.94■□□□□ 0.14
HNRNPU-228ENST00000640306 TRIM39Q9HCM9 518 aa15.94■□□□□ 0.14
HNRNPU-228ENST00000640306 NDUFAF4Q9P032 175 aa15.94■□□□□ 0.14
HNRNPU-228ENST00000640306 GOLGA4Q13439 2230 aaKnown RBP15.94■□□□□ 0.14
HNRNPU-228ENST00000640306 NINQ8N4C6 2090 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 DSCR3O14972 297 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 TPRG1LQ5T0D9 272 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 HHIPQ96QV1 700 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 BCL7BQ9BQE9 202 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 ELAC1Q9H777 363 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 PSORS1C1Q9UIG5 152 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 OGDHLQ9ULD0 1010 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 ATP11BQ9Y2G3 1177 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 PCDHGB3Q9Y5G1 929 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 CLDN24A6NM45 220 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 AGAP14A8MT82 685 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 ARHGEF33A8MVX0 844 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 FAM227AF5H4B4 570 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 SCAMP2O15127 329 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 NUAK1O60285 661 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 KCNK2O95069 426 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 OXSR1O95747 527 aaPredicted RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 PABPC1P11940 636 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 POU1F1P28069 291 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 GABRR2P28476 465 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 HNMTP50135 292 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 ELP6Q0PNE2 266 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 EXOC3L2Q2M3D2 409 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 ZNF385BQ569K4 471 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 UBE2UQ5VVX9 321 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 METTL2BQ6P1Q9 378 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.93■□□□□ 0.142e-10■■□□□ 11.7
HNRNPU-228ENST00000640306 Q6ZVL8 140 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 OTOP2Q7RTS6 562 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 LGI4Q8N135 537 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 CBARPQ8N350 705 aaPredicted RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 VOPP1Q96AW1 172 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 PITX2Q99697 317 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 FAM120CQ9NX05 1096 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 STOML2Q9UJZ1 356 aa15.93■□□□□ 0.14
HNRNPU-228ENST00000640306 AGAP5A6NIR3 686 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 METTL15A6NJ78 407 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 RAE1P78406 368 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 ST3GAL4Q11206 333 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 DMC1Q14565 340 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 ARMCX4Q5H9R4 360 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 ZNF362Q5T0B9 420 aaPredicted RBP15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 NPAS3Q8IXF0 933 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 DNAJC22Q8N4W6 341 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 SLAIN1Q8ND83 568 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 OR8J2Q8NGG1 315 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 CIDECQ96AQ7 238 aaPredicted RBP15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 TBC1D20Q96BZ9 403 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 OR4K3Q96R72 315 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 SIGLEC11Q96RL6 698 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 DOHHQ9BU89 302 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 MARCH7Q9H992 704 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 RUVBL1Q9Y265 456 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 MAP4K5Q9Y4K4 846 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 SSX4O60224 188 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 NR4A2P43354 598 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 SPINT3P49223 89 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 ATN1P54259 1190 aaPredicted RBP15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 SNRPD1P62314 119 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 TCAIMQ8N3R3 496 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 NFKBIDQ8NI38 313 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 WDR20Q8TBZ3 569 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 IGSF21Q96ID5 467 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 DEFB118Q96PH6 123 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 CDADC1Q9BWV3 514 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 GPATCH2Q9NW75 528 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 IMPAD1Q9NX62 359 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 ANKMY1Q9P2S6 941 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 SPASTQ9UBP0 616 aa15.92■□□□□ 0.14
HNRNPU-228ENST00000640306 PRAMEF25A6NGN4 478 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 GFYI3L273 518 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 SNPHO15079 494 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ARHGEF15O94989 841 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 SLC16A8O95907 504 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ADORA3P0DMS8 318 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 PRPH2P23942 346 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 HLA-FP30511 346 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 GGT2P36268 569 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ETV3P41162 512 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 RPS13P62277 151 aaKnown RBP15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 HBA1P69905 142 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 MEF2AQ02078 507 aaPredicted RBP15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 MED22Q15528 200 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 Q6ZNB5 142 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ZNF605Q86T29 641 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 HUS1BQ8NHY5 278 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 KCNS3Q9BQ31 491 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 CCM2Q9BSQ5 444 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 MRPL9Q9BYD2 267 aaKnown RBP15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 DUSP12Q9UNI6 340 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 CLCA1A8K7I4 914 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 PCDH17O14917 1159 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 C6orf47O95873 294 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 ADRA2AP08913 450 aa15.91■□□□□ 0.14
HNRNPU-228ENST00000640306 FADDQ13158 208 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms