RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MUM1Q2TAK8 710 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 FAM214AQ32MH5 1076 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 YOD1Q5VVQ6 348 aaPredicted RBP12.56□□□□□ -0.4
GTF3A-209ENST00000640289 TMEM214Q6NUQ4 689 aaKnown RBP12.56□□□□□ -0.4
GTF3A-209ENST00000640289 FRMD7Q6ZUT3 714 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 PRSS41Q7RTY9 318 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 VASH2Q86V25 355 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 PROSER1Q86XN7 944 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 ESX1Q8N693 406 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 TTLQ8NG68 377 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 OR7G3Q8NG95 312 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 WDR20Q8TBZ3 569 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 MGARPQ8TDB4 240 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 ZNF473Q8WTR7 871 aaKnown RBP12.56□□□□□ -0.4
GTF3A-209ENST00000640289 MR1Q95460 341 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
GTF3A-209ENST00000640289 CNTNAP3BQ96NU0 1288 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 ZNF382Q96SR6 550 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 CNTNAP3Q9BZ76 1288 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 SHCBP1LQ9BZQ2 653 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 CHST8Q9H2A9 424 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 RHBGQ9H310 441 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 KLHL31Q9H511 634 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 PADI1Q9ULC6 663 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
GTF3A-209ENST00000640289 PCM1Q15154 2024 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 A0A0A6YYC8 382 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 H0YIV9 168 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 I3L1I5 382 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 CLEC3AO75596 197 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 MLYCDO95822 493 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 KLK3P07288 261 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 SERPINA6P08185 405 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 CCNYL3P0C7X3 344 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 ZNF888P0CJ79 500 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 IL1RNP18510 177 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 HNRNPH1P31943 449 aaKnown RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 HPDP32754 393 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 STAT5AP42229 794 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 OR1D4P47884 311 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 NEK2P51955 445 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 EMP3P54852 163 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 WDR4P57081 412 aaKnown RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 DCDP81605 110 aaKnown RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 ABHD18Q0P651 414 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 GGTA1PQ4G0N0 100 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 TOR1AIP1Q5JTV8 583 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 GARNL3Q5VVW2 1013 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 CES4AQ5XG92 561 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 FAM198BQ6UWH4 519 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 ZNF517Q6ZMY9 492 aaPredicted RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 GPRIN3Q6ZVF9 776 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 NUDCD3Q8IVD9 361 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 SHISA5Q8N114 240 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 IL22RA1Q8N6P7 574 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 HUS1BQ8NHY5 278 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 PROKR1Q8TCW9 393 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 AGAP11Q8TF27 550 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 CT55Q8WUE5 264 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 UBE2E3Q969T4 207 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 KCNA7Q96RP8 456 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 MTERF1Q99551 399 aaKnown RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 PAIP2Q9BPZ3 127 aaKnown RBP12.55□□□□□ -0.4
GTF3A-209ENST00000640289 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 DRC3Q9H069 523 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 TNFRSF12AQ9NP84 129 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 MID1IP1Q9NPA3 183 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 SLC22A11Q9NSA0 550 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 TRPS1Q9UHF7 1281 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 CROTQ9UKG9 612 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 PCDHGA11Q9Y5H2 935 aa12.55□□□□□ -0.4
GTF3A-209ENST00000640289 SDK2Q58EX2 2172 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 A0A0G2JN53 185 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 TMEM8BA6NDV4 472 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 MAGEB17A8MXT2 336 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 KLK10O43240 276 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 TGFB1P01137 390 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 CAPN1P07384 714 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 TCN2P20062 427 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 AGXTP21549 392 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 F8A1P23610 371 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 GSTM2P28161 218 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 ARRB2P32121 409 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 FOXA1P55317 472 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 RAB8AP61006 207 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 NAA20P61599 178 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 ASPHQ12797 758 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 NKAIN1Q4KMZ8 207 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 SGO1Q5FBB7 561 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 MANEAQ5SRI9 462 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 HHATQ5VTY9 493 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
GTF3A-209ENST00000640289 ATG14Q6ZNE5 492 aa12.54□□□□□ -0.4
GTF3A-209ENST00000640289 COX15Q7KZN9 410 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms