RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NRTNQ99748 197 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 DUSP26Q9BV47 211 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 DPEP2Q9H4A9 486 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SMURF2Q9HAU4 748 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 SAMD4AQ9UPU9 718 aaKnown RBP14.51□□□□□ -0.09
TRIM3-215ENST00000639856 BTBD3Q9Y2F9 522 aa14.51□□□□□ -0.09
TRIM3-215ENST00000639856 YY2O15391 372 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SLC31A1O15431 190 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 KCNK5O95279 499 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 C1QCP02747 245 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 MAGEA2P43356 314 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 CDK9P50750 372 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ESRRGP62508 458 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 EPS8Q12929 822 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 TSTA3Q13630 321 aaPredicted RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 RBBP5Q15291 538 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ANKRD26P1Q6NSI1 321 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 KIAA1161Q6NSJ0 714 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ZCCHC8Q6NZY4 707 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SPESP1Q6UW49 350 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 CAMKMTQ7Z624 323 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 HS3ST5Q8IZT8 346 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 PJA1Q8NG27 643 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 OR9A1PQ8NGU1 263 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 OR5K1Q8NHB7 308 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 DNASE1L2Q92874 299 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 WDR34Q96EX3 536 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 RBM4BQ9BQ04 359 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 RBM4Q9BWF3 364 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SGPP1Q9BX95 441 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 TOR3AQ9H497 397 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ITM2CQ9NQX7 267 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 PLAGL1Q9UM63 463 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SH2B3Q9UQQ2 575 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 CFAP20Q9Y6A4 193 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 GABRR3A8MPY1 467 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SOX1O00570 391 aaPredicted RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 LATO43561 262 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SH3BGRLO75368 114 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 CPSF4O95639 269 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SLC5A2P31639 672 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 DCTP40126 519 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 RPS13P62277 151 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 MRPS21P82921 87 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SMAD4Q13485 552 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 VMACQ2NL98 169 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 CATSPEREQ5SY80 951 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 C10orf62Q5T681 223 aaPredicted RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 TTC23Q5W5X9 447 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ERICH5Q6P6B1 374 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 KIAA1324Q6UXG2 1013 aaKnown RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 LPCAT2Q7L5N7 544 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 PDZD3Q86UT5 571 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 HORMAD1Q86X24 394 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ZZZ3Q8IYH5 903 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 OXR1Q8N573 874 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 OR5AR1Q8NGP9 310 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SH3KBP1Q96B97 665 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 EFCAB11Q9BUY7 163 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 UBE2ZQ9H832 354 aaPredicted RBP14.5□□□□□ -0.09
TRIM3-215ENST00000639856 FBRSQ9HAH7 460 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 PRM3Q9NNZ6 103 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 ASF1AQ9Y294 204 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 DYRK1BQ9Y463 629 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 PCDHB11Q9Y5F2 797 aa14.5□□□□□ -0.09
TRIM3-215ENST00000639856 SCAMP1O15126 338 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 C1GALT1C1LP0DN25 315 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 NDUFV2P19404 249 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 TIA1P31483 386 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM3-215ENST00000639856 TAP2Q03519 686 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 SKIV2LQ15477 1246 aaKnown RBP14.49□□□□□ -0.09
TRIM3-215ENST00000639856 HKDC1Q2TB90 917 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 CPTPQ5TA50 214 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 CPZQ66K79 652 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 GALNT18Q6P9A2 607 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 CHST15Q7LFX5 561 aaPredicted RBP14.49□□□□□ -0.09
TRIM3-215ENST00000639856 GPR141Q7Z602 305 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 ZDHHC21Q8IVQ6 265 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 LAS2Q8IYD9 372 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 VPS37AQ8NEZ2 397 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 GPR156Q8NFN8 814 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 IL17FQ96PD4 163 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 PHPT1Q9NRX4 125 aaPredicted RBP14.49□□□□□ -0.09
TRIM3-215ENST00000639856 FAM118AQ9NWS6 357 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 BTNL2Q9UIR0 455 aa14.49□□□□□ -0.09
TRIM3-215ENST00000639856 GNG14A0A1W2PPG7 69 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 FOXE1O00358 373 aaPredicted RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 NOBOXO60393 691 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 E2F6O75461 281 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 ZNF682O95780 498 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 ACP5P13686 325 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PCSK6P29122 969 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 SHMT2P34897 504 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 HPCAL1P37235 193 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 HLCSP50747 726 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 TFF2Q03403 129 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 PPP1R8Q12972 351 aaKnown RBP14.48□□□□□ -0.09
TRIM3-215ENST00000639856 CCINQ13939 588 aa14.48□□□□□ -0.09
TRIM3-215ENST00000639856 SPIDRQ14159 915 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms