RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 CRTC1Q6UUV9 634 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 FGD2Q7Z6J4 655 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 TSPAN33Q86UF1 283 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC22A16Q86VW1 577 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 RNF130Q86XS8 419 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 FAM20CQ8IXL6 584 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 SAMD14Q8IZD0 417 aaPredicted RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 ZBTB8BQ8NAP8 495 aaPredicted RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 IRF7Q92985 503 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 IL1RAPQ9NPH3 570 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 FAIMQ9NVQ4 179 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 ING3Q9NXR8 418 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 TAS2R9Q9NYW1 312 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 MAFFQ9ULX9 164 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 OR10H2O60403 315 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 UGDHO60701 494 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 DNTTP04053 509 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 APODP05090 189 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 ETV3P41162 512 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 MAP2K4P45985 399 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 CLCA4Q14CN2 919 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 NHSL2Q5HYW2 709 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 LY6G5CQ5SRR4 150 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 PTRH1Q86Y79 214 aaKnown RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 CLIP4Q8N3C7 705 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 FAM46DQ8NEK8 389 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 UFD1Q92890 307 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 OTUB2Q96DC9 234 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 LGALS12Q96DT0 336 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 KLF16Q9BXK1 252 aaPredicted RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 FARSBQ9NSD9 589 aaKnown RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 PAK1IP1Q9NWT1 392 aaPredicted RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 SNX7Q9UNH6 387 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 RWDD3Q9Y3V2 267 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 LEFTY1O75610 366 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 IFNGP01579 166 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 GBAP04062 536 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 LAMP2P13473 410 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 CD72P21854 359 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 SUOXP51687 545 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 RAB33AQ14088 237 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 TSTQ16762 297 aaKnown RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 NDUFA9Q16795 377 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNF805Q5CZA5 627 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 RBM23Q86U06 439 aaKnown RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 LRRTM4Q86VH4 590 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 SHKBP1Q8TBC3 707 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 TFGQ92734 400 aaPredicted RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 GTF2H4Q92759 462 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 C12orf66Q96MD2 445 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 CLEC4MQ9H2X3 399 aaPredicted RBP8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 ANKRA2Q9H9E1 313 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 FBXW2Q9UKT8 454 aa8.3□□□□□ -1.08
HNRNPU-219ENST00000639628 TARM1B6A8C7 271 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SCAMP2O15127 329 aaKnown RBP8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TPST2O60704 377 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 MRPS14O60783 128 aaKnown RBP8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SMIM18P0DKX4 95 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 C1GALT1C1LP0DN25 315 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 ADH5P11766 374 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 NCBP2P52298 156 aaKnown RBP eCLIP8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNF45Q02386 682 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 ACVR1Q04771 509 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 LGALS3BPQ08380 585 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 DMPKQ09013 629 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 IL18Q14116 193 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 ZNF311Q5JNZ3 666 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 LCN1P1Q5VSP4 162 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC8B1Q6J4K2 584 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TMEM207Q6UWW9 146 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TRIM74Q86UV6 250 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TRIM73Q86UV7 250 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 ZSWIM9Q86XI8 627 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 DCUN1D3Q8IWE4 304 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 FRS2Q8WU20 508 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 GAB3Q8WWW8 586 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SLC9A6Q92581 669 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 APIPQ96GX9 242 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 MND1Q9BWT6 205 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TTLL2Q9BWV7 592 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 BHLHE41Q9C0J9 482 aaPredicted RBP8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SLAMF8Q9P0V8 285 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TAC3Q9UHF0 121 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 GJD2Q9UKL4 321 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 MGAT4BQ9UQ53 548 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3DA0A087WVF3 549 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3IA0A087WXS9 549 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3EA0A087X179 549 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3KA0A087X1G2 549 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 A0A1B0GVG6 124 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 GSAPA4D1B5 854 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3FA6NER0 549 aaPredicted RBP8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3LB9A6J9 549 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 PGRMC2O15173 223 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SNX4O95219 450 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 SBK3P0C264 359 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 TBC1D3HP0C7X1 549 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 UQCRC2P22695 453 aa8.29□□□□□ -1.08
HNRNPU-219ENST00000639628 ARF5P84085 180 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms