RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 VEZF1Q14119 521 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.65■□□□□ 0.9
CLN6-224ENST00000638076 SHQ1Q6PI26 577 aaKnown RBP20.65■□□□□ 0.9
CLN6-224ENST00000638076 TMIGD1Q6UXZ0 262 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 EIF3MQ7L2H7 374 aaKnown RBP20.65■□□□□ 0.9
CLN6-224ENST00000638076 C16orf78Q8WTQ4 265 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 UBE2E3Q969T4 207 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 HSH2DQ96JZ2 352 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 DDX18Q9NVP1 670 aaKnown RBP20.65■□□□□ 0.9
CLN6-224ENST00000638076 DZANK1Q9NVP4 752 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 FABP3P05413 133 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 KLK1P06870 262 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 TPD52P55327 224 aaPredicted RBP20.65■□□□□ 0.9
CLN6-224ENST00000638076 PHEXP78562 749 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 LRRC74AQ0VAA2 488 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 DYNC1I2Q13409 638 aaKnown RBP20.65■□□□□ 0.9
CLN6-224ENST00000638076 BIRC2Q13490 618 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 CST6Q15828 149 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 OR2T5Q6IEZ7 315 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 METTL4Q8N3J2 472 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 OR2T29Q8NH02 315 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 MAL2Q969L2 176 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 KXD1Q9BQD3 176 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 SPATA9Q9BWV2 254 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 ATAD3AQ9NVI7 634 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 TMEFF2Q9UIK5 374 aaPredicted RBP20.65■□□□□ 0.9
CLN6-224ENST00000638076 PCDHGA8Q9Y5G5 932 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 GMEB1Q9Y692 573 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 KLHL18O94889 574 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 DIRAS1O95057 198 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 FKBP9O95302 570 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 FURINP09958 794 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 EEF1B2P24534 225 aaKnown RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 TAS2R50P59544 299 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 HBA1P69905 142 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 VLDLRP98155 873 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 C2orf80Q0P641 193 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 ANGPTL8Q6UXH0 198 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 TMEM26Q6ZUK4 368 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 VN1R5Q7Z5H4 357 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 DCP2Q8IU60 420 aaKnown RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 NAGSQ8N159 534 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 TM9SF3Q9HD45 589 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 MBNL1Q9NR56 388 aaKnown RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 SERGEFQ9UGK8 458 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 KIF26AQ9ULI4 1882 aaPredicted RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 MYO1GB0I1T2 1018 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 TRMUO75648 421 aaKnown RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 PMS2P3Q13401 168 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 LAPTM4AQ15012 233 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 METRNLQ641Q3 311 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 KCTD8Q6ZWB6 473 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 R3HCC1LQ7Z5L2 792 aaKnown RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 FAM129CQ86XR2 697 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 CLVS1Q8IUQ0 354 aaPredicted RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 OR5K2Q8NHB8 316 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 CIDECQ96AQ7 238 aaPredicted RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 TBC1D20Q96BZ9 403 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 PPCDCQ96CD2 204 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 BARD1Q99728 777 aaKnown RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 ADNPQ9H2P0 1102 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 POLR1BQ9H9Y6 1135 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 TAC3Q9UHF0 121 aa20.64■□□□□ 0.89
CLN6-224ENST00000638076 FAF1Q9UNN5 650 aaPredicted RBP20.64■□□□□ 0.89
CLN6-224ENST00000638076 LOC100130705A0A1B0GUX0 176 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 C6orf47O95873 294 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 APODP05090 189 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 EIF2DP41214 584 aaKnown RBP20.63■□□□□ 0.89
CLN6-224ENST00000638076 SHHQ15465 462 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 FAM71E1Q6IPT2 247 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 KRT78Q8N1N4 520 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 TPD52L3Q96J77 140 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 RSPH9Q9H1X1 276 aaPredicted RBP20.63■□□□□ 0.89
CLN6-224ENST00000638076 MYNNQ9NPC7 610 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 SPASTQ9UBP0 616 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 BAG5Q9UL15 447 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 OR1A2Q9Y585 309 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 ORC6Q9Y5N6 252 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 UNC80Q8N2C7 3258 aa20.63■□□□□ 0.89
CLN6-224ENST00000638076 IL7RP16871 459 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 CASP9P55211 416 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 PDE7AQ13946 482 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 CYP2A13Q16696 494 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 ZNF852Q6ZMS4 543 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 CEP68Q76N32 757 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 HDDC3Q8N4P3 179 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 OXR1Q8N573 874 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 GOT1L1Q8NHS2 421 aaPredicted RBP20.62■□□□□ 0.89
CLN6-224ENST00000638076 PBX4Q9BYU1 374 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 ASPSCR1Q9BZE9 553 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 LIN28AQ9H9Z2 209 aaKnown RBP20.62■□□□□ 0.89
CLN6-224ENST00000638076 RAPGEFL1Q9UHV5 662 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 TSC22D4Q9Y3Q8 395 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 XIRP2A4UGR9 3374 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 TRPM6Q9BX84 2022 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 A0A1W2PP55 124 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 ERGP11308 486 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 PTX3P26022 381 aaPredicted RBP20.62■□□□□ 0.89
CLN6-224ENST00000638076 AQP1P29972 269 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 CRATP43155 626 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms