RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SSTR1P30872 391 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 SOX11P35716 441 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 MRPS25P82663 173 aaKnown RBP17.9■□□□□ 0.46
CLN6-221ENST00000637494 C2orf54Q08AI8 447 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 USP10Q14694 798 aaKnown RBP17.9■□□□□ 0.46
CLN6-221ENST00000637494 ZXDCQ2QGD7 858 aaPredicted RBP17.9■□□□□ 0.46
CLN6-221ENST00000637494 BTBD16Q32M84 506 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 RPUSD3Q6P087 351 aaKnown RBP17.9■□□□□ 0.46
CLN6-221ENST00000637494 NXPE4Q6UWF7 544 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 PDSS2Q86YH6 399 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 ZNF740Q8NDX6 193 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 NT5CQ8TCD5 201 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 HAS2Q92819 552 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 PEX11GQ96HA9 241 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 MAGEB10Q96LZ2 347 aaPredicted RBP17.9■□□□□ 0.46
CLN6-221ENST00000637494 PSMG3-AS1Q96PY0 264 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 CPNE1Q99829 537 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 CAPS2Q9BXY5 557 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 ABI3Q9P2A4 366 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 IKZF3Q9UKT9 509 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 NBASA2RRP1 2371 aa17.9■□□□□ 0.46
CLN6-221ENST00000637494 SHANK1Q9Y566 2161 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 ZNF860A6NHJ4 632 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 GALR3O60755 368 aaPredicted RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 SEMA7AO75326 666 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 SEC24DO94855 1032 aaPredicted RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 WDR47O94967 919 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 ITGAMP11215 1152 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 STMN1P16949 149 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 GNAZP19086 355 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 SCTRP47872 440 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 ETF1P62495 437 aaKnown RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 REEP5Q00765 189 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 TSNQ15631 228 aaKnown RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 NSDHLQ15738 373 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 EXT1Q16394 746 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 DEFB134Q4QY38 66 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 C3orf62Q6ZUJ4 267 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 LANCL3Q6ZV70 420 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 CYS1Q717R9 158 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 ANKRD37Q7Z713 158 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 CEP97Q8IW35 865 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 TCAIMQ8N3R3 496 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 BCORP1Q8N888 145 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 ST6GALNAC3Q8NDV1 305 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 CATSPER1Q8NEC5 780 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 GRHL3Q8TE85 626 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 PSMF1Q92530 271 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 IMMP1LQ96LU5 166 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 BARD1Q99728 777 aaKnown RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 PHACTR1Q9C0D0 580 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 DERL2Q9GZP9 239 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 CNOT10Q9H9A5 744 aaKnown RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 CLK4Q9HAZ1 481 aaKnown RBP17.89■□□□□ 0.45
CLN6-221ENST00000637494 STMN3Q9NZ72 180 aa17.89■□□□□ 0.45
CLN6-221ENST00000637494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
CLN6-221ENST00000637494 PSMD12O00232 456 aaPredicted RBP17.88■□□□□ 0.45
CLN6-221ENST00000637494 FANCGO15287 622 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 S100BP04271 92 aaPredicted RBP17.88■□□□□ 0.45
CLN6-221ENST00000637494 CELA2AP08217 269 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 ZNF888P0CJ79 500 aaPredicted RBP17.88■□□□□ 0.45
CLN6-221ENST00000637494 GP5P40197 560 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 PLTPP55058 493 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 SNRPNP63162 240 aaKnown RBP17.88■□□□□ 0.45
CLN6-221ENST00000637494 ZNF33BQ06732 778 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 ABRAXAS2Q15018 415 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 INAQ16352 499 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 PLAG1Q6DJT9 500 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 SYT10Q6XYQ8 523 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 CCDC25Q86WR0 208 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 CTAGE3PQ8IX95 158 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 AFAP1L2Q8N4X5 818 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 PLPP5Q8NEB5 264 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 TTLQ8NG68 377 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 ANKRD49Q8WVL7 239 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 FAR1Q8WVX9 515 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 TBC1D20Q96BZ9 403 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 ZNF354BQ96LW1 612 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 LPAR4Q99677 370 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 RBBP8Q99708 897 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 RBCK1Q9BYM8 510 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 RNF32Q9H0A6 362 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 KCNK13Q9HB14 408 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 PLA2G3Q9NZ20 509 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 SLC5A6Q9Y289 635 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 NTNG1Q9Y2I2 539 aa17.88■□□□□ 0.45
CLN6-221ENST00000637494 MTO1Q9Y2Z2 717 aaKnown RBP17.88■□□□□ 0.45
CLN6-221ENST00000637494 DOCK10Q96BY6 2186 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 IGHV3-20A0A0C4DH32 117 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 NCF1BA6NI72 391 aaPredicted RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 A8MUI8 341 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 NCF1CA8MVU1 366 aaPredicted RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 MAGEB17A8MXT2 336 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 CDC123O75794 336 aaPredicted RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 FHP07954 510 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 CCDC166P0CW27 439 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 EDN3P14138 238 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 NCF1P14598 390 aaPredicted RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 HPDP32754 393 aaPredicted RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 SPRP35270 261 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms