RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TAF10Q12962 218 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TUBB2AQ13885 445 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PCLAFQ15004 111 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TNIP1Q15025 636 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NONOQ15233 471 aaKnown RBP eCLIP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MCMDC2Q4G0Z9 681 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CBWD6Q4V339 395 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SYT14P1Q58G82 188 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CBWD3Q5JTY5 395 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 C9orf152Q5JTZ5 239 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC35D3Q5M8T2 416 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 GRTP1Q5TC63 336 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 KRT79Q5XKE5 535 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF774Q6NX45 483 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF530Q6P9A1 599 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CTR9Q6PD62 1173 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SHQ1Q6PI26 577 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIM65Q6PJ69 517 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM207Q6UWW9 146 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MOB2Q70IA6 237 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 DET1Q7L5Y6 550 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NUP54Q7Z3B4 507 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NOTCH2NLQ7Z3S9 236 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CENPVQ7Z7K6 275 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TMPRSS11BQ86T26 416 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PIGZQ86VD9 579 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 LACC1Q8IV20 430 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF595Q8IYB9 648 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CEP57L1Q8IYX8 460 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FBXL16Q8N461 479 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 RYBPQ8N488 228 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MAPKAPK5-AS1Q8N8E1 139 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC63Q8NA47 563 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NOA1Q8NC60 698 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 KCTD6Q8NC69 237 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PAPD5Q8NDF8 572 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NPEPL1Q8NDH3 523 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 OR6J1Q8NGC5 347 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 OR4K1Q8NGD4 311 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2T11Q8NH01 316 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MOSPD2Q8NHP6 518 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FGFBP3Q8TAT2 258 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SMAP2Q8WU79 429 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PTPMT1Q8WUK0 201 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PHLDA1Q8WV24 401 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 HPSE2Q8WWQ2 592 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 METTL21AQ8WXB1 218 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM190Q8WZ59 177 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PIGBQ92521 554 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF622Q969S3 477 aaKnown RBP eCLIP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MOB3AQ96BX8 217 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF486Q96H40 463 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 C18orf12Q96KH6 178 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF830Q96NB3 372 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 DGAT2Q96PD7 388 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 USP28Q96RU2 1077 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 RAD9AQ99638 391 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NKX3-1Q99801 234 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 OPRPNQ99935 248 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC3Q9BQI4 270 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SLF1Q9BQI6 1058 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 BTBD10Q9BSF8 475 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 UBAC1Q9BSL1 405 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 THUMPD2Q9BTF0 503 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CABLES2Q9BTV7 478 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FUCA2Q9BTY2 467 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TUBB2BQ9BVA1 445 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MRPL1Q9BYD6 325 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PNNQ9H307 717 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 RNF121Q9H920 327 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 XAB2Q9HCS7 855 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CHST11Q9NPF2 352 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 B3GAT2Q9NPZ5 323 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 EQTNQ9NQ60 294 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PIH1D3Q9NQM4 214 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF71Q9NQZ8 489 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SDR39U1Q9NRG7 319 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ZDHHC18Q9NUE0 388 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SPHK1Q9NYA1 384 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TMOD3Q9NYL9 352 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NUDT4Q9NZJ9 180 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TBC1D7Q9P0N9 293 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TXNDC16Q9P2K2 825 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TUBE1Q9UJT0 475 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 GMEB2Q9UKD1 530 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MTUS1Q9ULD2 1270 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 STUB1Q9UNE7 303 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PA2G4Q9UQ80 394 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MOB4Q9Y3A3 225 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PYGO1Q9Y3Y4 419 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ANGPTL3Q9Y5C1 460 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PTPRBP23467 1997 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SHROOM3Q8TF72 1996 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 HTTP42858 3142 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MYOFQ9NZM1 2061 aa0.96□□□□□ -2.25
SMARCB1-209ENST00000635578 HEG1Q9ULI3 1381 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ATRXP46100 2492 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 LRRK1Q38SD2 2015 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MYO7AQ13402 2215 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms